|
Name : Asuc_1706 (Asuc_1706) Accession : YP_001344993.1 Strain : Actinobacillus succinogenes 130Z Genome accession: NC_009655 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1873716 - 1875650 bp Length : 1935 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGATTATTTGTTGCTGAAAAACCCAGTCTGGCCCGCGCTATCGCCGATGTTCTGCCGAAACCGCACAGTCGCGGCGA CGGTTTTATTCGCTGCGGCGAAAACGATTATGTAACGTGGTGCGTGGGACATTTACTGGAACAGGCGGAACCCGATGCCT ACAACCCCAGCTACAAACAATGGCGGTTGGAACATTTACCTATCGTGCCGCAAAAATGGCAACTGATTCCCCGGAAAGAA GTGGCTAAACAGCTGAAAATCGTAGAAAAGCTGATTCACCAGGCGGACGAACTGGTTAACGCCGGCGACCCTGATCGGGA AGGTCAGTTATTGGTGGACGAAGTGTTCAGTTACGCCGATTTGCCGGCGGATAAAAAAGATAAAATTCAGCGTTGCTTAG TGAGCGATCTCAACCCGAATGCGGTGGAAAAAGCCGTTAATAAGCTACAACCGAACCGCAATTTTATTCCTTTAGCGACC TCCGCACTCGCCCGCGCCCGCGCCGACTGGCTGTACGGTATCAATATGACGCGCGCCTACACCATTCGCGGACGTCAAGC CGGCTACAACGGCGTACTGTCCGTTGGACGCGTGCAAACGCCCGTGTTAGGACTCATTGTGCGACGCGATCTGGAAATCG AAAATTTTCGACCGAAAGATTTTTTTGAAGTACTGGCGCAGATAAAAAGCGAACAAAATCCGACCGCACTTTCCTTCACC GCCTTGTGGCAACCTTCCAAAGCCTGCGAAGATTATCAGGATGAAGACGGACGCGTGCTTTCCCGCGCTTTAGCGGAAAA TGTGATTAAGCGCATTACTCGGCAACCGGCGGAAGTAACGGCATACGAAGATAAACGGGAAAAGCAAACCGCACCGCTGC CCTATTCGCTTTCCGCTTTACAAATCGACGCGGCAAAACGTTTTGCTCTTTCCGCGCAGGATGTGTTGGACACCTGCCAG AGTTTGTACGAAAAGCACAAGCTGATTACCTATCCGCGTTCCGATTGCCGTTATCTGCCGAACGAACATTTTGCCGATCG TCATGCGGTGATGAACGCCATTTCCGTACATTGTACGGCATATCAAACGCTGCCGAGTGCGGTGAATTCCGAACAAAAAA ACCGTTGCTGGAACGATAAAAAAGTGGAAGCACACCACGCTATTATTCCGACGGCAAAAAACCGTGCGGTAAGTTTAACC GCGCGGGAACAAGACATTTACGGTTTGATTGCCCGACAATATCTCATGCAGTTCTGCCCGGACGCCGAATACCGCAAAAG TAAAATCACCCTGAATATTGCAGGCGGCACCTTTATTGCGCAGGCGCGAAATTTACAGATAGCCGGCTGGAAAGAATTAA TCGGCAAAGAAGATGACGACGAGCAACTTGAAGCGCCTTTGCCTGTGGTGAAAAAAGGGCAAATGCTGTTTTGCGAGAAA GGCGAGATCGTCAGCAAGAAAACCCAACCGCCCAAACCGTTTACGGATGCGACATTGCTTTCCGCCATGACGGGTATCGC CCGTTTCGTACAGGATAAAGAACTGAAAAAAATCCTGCGTGAAACCGACGGTTTAGGCACGGAAGCCACCCGGGCCGGTA TTATCGAACTGTTATTCAAACGCGGATTTCTGTATAAAAAAGGGCGTAACATTCACAGTACCGAAGCAGGACGTATTCTG ATTCAGGCATTGCCGGATCTGGCGACCCAGCCCGATATGACGGCACAATGGGAAGCACAGCTAAACGGCATCAGTCAAAA AGAAACCAGTTATCAGTCTTTCATGTTTCAACTGACTCAAATGCTGCCGGAGTTGGTGCAATTCGTGAATTTTTCCGCCC TGCGCCGACTGAGTGCCGTTGCCGACCGACCAAAGCCGACATTCAAACGCAAAGCAAGAAAAACAGCCGATAAAAGTGCG GTCAAATCCGTTTAG Protein sequence : MRLFVAEKPSLARAIADVLPKPHSRGDGFIRCGENDYVTWCVGHLLEQAEPDAYNPSYKQWRLEHLPIVPQKWQLIPRKE VAKQLKIVEKLIHQADELVNAGDPDREGQLLVDEVFSYADLPADKKDKIQRCLVSDLNPNAVEKAVNKLQPNRNFIPLAT SALARARADWLYGINMTRAYTIRGRQAGYNGVLSVGRVQTPVLGLIVRRDLEIENFRPKDFFEVLAQIKSEQNPTALSFT ALWQPSKACEDYQDEDGRVLSRALAENVIKRITRQPAEVTAYEDKREKQTAPLPYSLSALQIDAAKRFALSAQDVLDTCQ SLYEKHKLITYPRSDCRYLPNEHFADRHAVMNAISVHCTAYQTLPSAVNSEQKNRCWNDKKVEAHHAIIPTAKNRAVSLT AREQDIYGLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARNLQIAGWKELIGKEDDDEQLEAPLPVVKKGQMLFCEK GEIVSKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLYKKGRNIHSTEAGRIL IQALPDLATQPDMTAQWEAQLNGISQKETSYQSFMFQLTQMLPELVQFVNFSALRRLSAVADRPKPTFKRKARKTADKSA VKSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-107 | 42 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-102 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-109 | 41 |
