Gene Information

Name : Asuc_1668 (Asuc_1668)
Accession : YP_001344955.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1832309 - 1832980 bp
Length : 672 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM0448 hypothetical Y. pestis

DNA sequence : 
TTGTCAAACTACGTTATTGAAACCCAGCATTTATACAAAAGATTCGGAACCGTTACCGCTCTGGAAGACATTAATATCCA
AATCAAAGAGGGCGAATTTGTCGCTATTATGGGCGCATCCGGTTCAGGCAAAACCACGTTAATGAATATTCTCACCGGGC
TGGACACCGCAACCGAAGGCAAAGTGATTTTAGACGGCGTAGATGCCGCCCGACTTGATGAAACGGGACGTCAACGCTTC
CGCGCCGAAAAAATAGGATTAGTGTTCCAGCAATTTCATCTGATTCCTTATTTAACTGCCCTGGAAAACGTGATGCTGGC
CCAGCACTATCACAGTGTAATCGATGAAGCGGCGGCACGCGCCGTACTCGAACAAGTCGGACTGGGAGAACGAATGTCGC
ACCGTCCCAGCCAGCTCTCCGGCGGCGAACAGCAACGGGTATGTATCGCACGGGCATTAGTGAACCAACCGCCGGTAATT
TTTGCCGACGAACCTACCGGAAATCTGGATGAGAAAAACGAAGCCTTAGTGCTCAAATTATTACAGGATCTCAATAAACA
GGGACGGACTGTCGTTATGGTTACTCACAATCCGGAACTCGGTGAGCTGGCGGATCGTATTATTTATTTCCATCACGGTA
AATTTGTCAAGGAAGAACATAATGCGCATTAA

Protein sequence : 
MSNYVIETQHLYKRFGTVTALEDINIQIKEGEFVAIMGASGSGKTTLMNILTGLDTATEGKVILDGVDAARLDETGRQRF
RAEKIGLVFQQFHLIPYLTALENVMLAQHYHSVIDEAAARAVLEQVGLGERMSHRPSQLSGGEQQRVCIARALVNQPPVI
FADEPTGNLDEKNEALVLKLLQDLNKQGRTVVMVTHNPELGELADRIIYFHHGKFVKEEHNAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asuc_1668 YP_001344955.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-41 47
Asuc_1668 YP_001344955.1 ABC transporter-like protein NC_012469.1.7685735. Protein 3e-38 46
Asuc_1668 YP_001344955.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-31 45
Asuc_1668 YP_001344955.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-33 44
Asuc_1668 YP_001344955.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-36 41