Gene Information

Name : Asuc_1427 (Asuc_1427)
Accession : YP_001344721.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 1589475 - 1590893 bp
Length : 1419 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGGCTCGTCAACCTTCACAAAATTTACCGCAGGAACGCGATCAACAAACCGCGCAAGTAGCTATTCCACCGCATTCCAT
TGAAGCCGAACAGGCAGTGTTGGGAGCGATCATGCTGAATAACCGGCACTGGGAAAATGTGGTGGAGCGGGTGATTGCCG
ACGATTTTTATCTTGCGGCGCACCGGATTATTTTCCAGGAAATGGAAAATCTGACTCGTCAAAACCAACCTATCGATTTG
CTGACCTTGGATCAGGCACTGAAAAACAAAGGTATTATCGACGATGTAGGCGGGTTTGCCTATTTGGCGGAGTTATCCAA
AAACACGCCGAGCGCAGCGAATATTAACGCCTATTCGGACATTGTGCGGGAAAAAGCGATTCTGCGCGATTTAATCGGTG
TCAGTAACAATATCGCCCAGCGGGCTTATTCGCCGAAAGGGAAGGACGTTAAGGAAATTCTGGATGAGGCGGAACGGGAT
GTGTTCACCATTGCGGAAAAACGTACTACGCAGAATGAAGGGCCGGAAAATGTAGTGAATATTTTGGAACGGACGATCAC
CAAAATCGAAACTTTGAAAGCCATGGGGGCCGGCAATAACGGGATTACGGGAGTAACCACAGGATTTGTGGATTTAGACA
AGAAAACCGCCGGGTTGCAGCCGTCGGATTTAGTCATTGTGGCGGCTCGTCCGTCTATGGGGAAAACCACTTTTGCGATG
AATTTGTGTGAAAATGCGGCAATGGCAAGTGATAAACCCGTATTGATTTTCAGCCTTGAAATGCCGGCGGATCAAATTAT
GATGCGTACTTTAGCCTCACTTTCGCGGGTCGATCAAACCGCTATCCGAACCGGGCAAATCGAAGATGACGGCGACTGGG
CGAAAATTTCCAGTACCGTAGCGTTACTCAGTGAAAAATCCAATATGTATATTGATGATTCAGCCGGATTAACGCCGACG
GAACTGCGTTCCCGCGCCCGTCGGGTATACCGCGAACGAGGCGGATTAAGTCTGATTATGGTGGATTACCTGCAATTAAT
GCGGGCGCCGGGATTTGATAACCGAACCCTCGAAATCGCCGAAATTTCCCGTTCCCTGAAAGCGTTGGCAAAAGAGCTGG
AAGTTCCCGTTGTCGCGTTGTCGCAATTAAACCGTACGCTGGAAAACCGCACGGATAAAAGGCCGGTGAATTCCGATTTG
CGTGAATCGGGTTCCATCGAACAGGACGCGGATTTAATTATGTTCATCTATCGCGATGAGGTATACCACGAAACCACGGA
AGAAAATAAAAACGTGGCGGAAATCATTATCGGTAAGCAGCGTAACGGACCGATTGGACGGGTGCGTTTAACCTTTCAGG
GACAGTATTCGCGGTTTGATAATTATGCGGGCTCTTTACCGTTTGACGATAATTACTAA

Protein sequence :
MARQPSQNLPQERDQQTAQVAIPPHSIEAEQAVLGAIMLNNRHWENVVERVIADDFYLAAHRIIFQEMENLTRQNQPIDL
LTLDQALKNKGIIDDVGGFAYLAELSKNTPSAANINAYSDIVREKAILRDLIGVSNNIAQRAYSPKGKDVKEILDEAERD
VFTIAEKRTTQNEGPENVVNILERTITKIETLKAMGAGNNGITGVTTGFVDLDKKTAGLQPSDLVIVAARPSMGKTTFAM
NLCENAAMASDKPVLIFSLEMPADQIMMRTLASLSRVDQTAIRTGQIEDDGDWAKISSTVALLSEKSNMYIDDSAGLTPT
ELRSRARRVYRERGGLSLIMVDYLQLMRAPGFDNRTLEIAEISRSLKALAKELEVPVVALSQLNRTLENRTDKRPVNSDL
RESGSIEQDADLIMFIYRDEVYHETTEENKNVAEIIIGKQRNGPIGRVRLTFQGQYSRFDNYAGSLPFDDNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-102 51
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-102 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-98 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-101 49
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 5e-96 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 5e-83 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-91 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-91 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-78 44