Gene Information

Name : Asuc_0097 (Asuc_0097)
Accession : YP_001343412.1
Strain : Actinobacillus succinogenes 130Z
Genome accession: NC_009655
Putative virulence/resistance : Unknown
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 115865 - 117031 bp
Length : 1167 bp
Strand : -
Note : PFAM: polysaccharide export protein; KEGG: msu:MS1487 periplasmic protein involved in polysaccharide export

DNA sequence :
ATGAATAAATTAACTAAATCTCTATTTTTAGCCGGGTTAGGATTATCTCTCTCATCTTGTTCGGTATTTCTGCCGGACAG
CCATAAATCGCCTATTTCAAAAAGACCTGCGCAGGTCGTCGGTGAAAATGTGGATTTGGCTAAAGCGATAGATGCTTATC
TGATTACACCGCAGTTATTGAAAACGCTGAAACCGATGAATGCATCGGCGCAGTCTAATCTGAATTTGGACAGAGAACTG
AGTAATTATCAATACCGTGTCGGGGTCGGTGACGTACTGAATGTTACCGTGTGGGATCATCCTGAATTAACTACTCCGGC
CGGCTCTTACCGTTCATCGGCAGAAGCGGGAAATCAGGTTCATGCAAACGGAACGATGTTTTATCCTTATGCAGGTAATA
TCAAAGTAGCGGGCTTGACCGTAGGTCAAATCCGTAGCCGTTTAACCAAAGCGTTATCTAATTATATTGCAGAACCGCAG
GTTGAAGTAAATGTTGCTTCGTTCCAGTCGCAAAAAGCCTATGTAACGGGTGAAGTTAAATCGCCGGGTCAACAGTTTAT
TACGAATGTGCCTCTTACTTTGCTGGATGCCATTAATAAGGCCGGCGGATTAGCGGATAATGCCAACTGGCACAATGTGA
CGCTGACCCGAAACGGACGGGATGAGGTCATTTCGGTAGAAGCGTTAATCCAACGCGGTGATCTGACGCAGAACCGCCTG
CTGCAAAACGGCGATATTGTGCATATACCGCGCAACGATACCATGAAAATTTTTGTGGTGGGAGAAGTGGTACAATCGCA
ACTGCTGACTATCGGACGTAACGGTATGACTTTAACGGAAGCGTTGAGTGCCAGTGGCGGTATCGACAAATTGTCTTCCG
ATGCCACAGGGATTTTCGTAATTCGTGGTCAGCGCGGCAAACATGAAATGGTTCAGGATAATAATGGTGAAAAAATTGAA
AAAGTCGCCAATATTTATCAGTTGGACGTTACGAATCCGACCGCTTATATTTTGGGTACCGAGTTCTATCTGCAACCGCA
TGATGTCGTTTATGTAACGACAGCGCCGGTTTCCCGCTGGAACCGTGTGATTTCTCAAGTCGTACCGACTATCAGCGGAT
TTAACGACTTAACCGAAGGCGTATTACGTATCAGAACATGGCCTTAA

Protein sequence :
MNKLTKSLFLAGLGLSLSSCSVFLPDSHKSPISKRPAQVVGENVDLAKAIDAYLITPQLLKTLKPMNASAQSNLNLDREL
SNYQYRVGVGDVLNVTVWDHPELTTPAGSYRSSAEAGNQVHANGTMFYPYAGNIKVAGLTVGQIRSRLTKALSNYIAEPQ
VEVNVASFQSQKAYVTGEVKSPGQQFITNVPLTLLDAINKAGGLADNANWHNVTLTRNGRDEVISVEALIQRGDLTQNRL
LQNGDIVHIPRNDTMKIFVVGEVVQSQLLTIGRNGMTLTEALSASGGIDKLSSDATGIFVIRGQRGKHEMVQDNNGEKIE
KVANIYQLDVTNPTAYILGTEFYLQPHDVVYVTTAPVSRWNRVISQVVPTISGFNDLTEGVLRIRTWP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 1e-98 59