Gene Information

Name : Mmwyl1_0813 (Mmwyl1_0813)
Accession : YP_001339682.1
Strain : Marinomonas sp. MWYL1
Genome accession: NC_009654
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 897438 - 899417 bp
Length : 1980 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; KEGG: vvu:VV1_0775 predicted nucleoside-diphosphate su

DNA sequence :
ATGATGATTAAAAAGTTTGATTTCCTTTGGTCTCTTCCTCGTTTTTATAAACGTCTTATCAGCTTAGCGGTTGATTCTGT
TTTTGTTTATCTTGCGTTTGTTTTTGCTTACTGGGCGCGATTGGGTGAGTTTAGTGCCTTTAAAGGCCATTCTATTTGGC
TTGTGGTGGCGGGTACTATCGCGGTTACTTTGTTAGTGAATATAAAGCTTGGTTTATATCGGGCGATTCTGCGTTATTTA
ACTTTTCATGCTTTTAGCGCGATTTTAGTTGGTGCGGCTATTTCTGCATTGAGTATTACGTCTTTTGCGTATTTCTTTGA
GGCGAATATTCCACGTACTGTGCCAATTATTTATTTTCCTTTTTTGGTTATGTTGTGTGGTGGTTCTCGGGTTTTGATAC
GTGGCTTATTGACTCAGGCTCCACAAAAAGGATCTGAATCTGTATTGGTTTTTGGTGCTGGATCTACTGGTAGGCAGTTG
ACTTTGGCGCTTCGTCAGGCTTCTAGTTATCGCGTGAAGGGTTTTATCGATCGTGATGAGTCTTTAGCCAATACCATTAT
TCAGGGTGTGCCTGTTTATAATGTCGATAAAATTGGTGAATTAATCGAAAAATACGACATTGAAAAGGTGTTGTTAGCTA
TTCCTAAGGCGAGTCGTTCTGAACGGAAGCAAGTGATCGAACAACTCATGCCTTATCCGGTGGAAGTGCTTACCGTGCCA
GACTTTAATGACATAGTAACAGGTAAGGCTAAGGTAAGTGAGCTACAAGACGTTGCTGTCGATGATTTGCTAGGTCGGGA
TGTGGTAGAACCTGTTGCCTCGTTAATGCAGGCGAATATCTCTGGCAAAGTGGTCATGGTTACAGGGGCTGGCGGTTCGA
TAGGCTCGGAGTTATGTCGTCAGATTATAGCGCAGCAGCCTAGTACCTTGATTGTATTTGATGTGTCTGAATATGCCGTG
TATCAGATAGATAAAGAGCTTAATGAGATTCTTGAGCAAGAGTCTTTTAATATCAAAATTGTGCCTTTGATTGGCTCTGT
GCAGCGTATTAATCGCTTAGCTTCTACCATGAAGGCATTTGGGGTTAATACTGTTTACCACGCGGCGGCTTATAAACACG
TGCCATTGGTTGAATACAATGTAGTTGAAGGCGTACGAAACAATGCTTTTGGGACTTATTATTCCGCTAAAGCGGCGATT
GAAAGTGGTGTGGAATCCTTCGTATTAATCTCTACAGATAAAGCTGTTCGACCAACTAATGTGATGGGCGCAACAAAACG
TATGGCGGAGCTGGGGTTGCAAGCCTTGGCCGAAGCTGAAGCGAAGAAAGCCGCTAAACAAGAAAAATTTACCCGTTTCT
GTATGGTGCGTTTTGGTAATGTGCTTGGCTCTTCTGGCTCGGTTATTCCTGTCTTTAAAAAGCAAATTCTGGAAAACCAG
CCTATTACGGTGACACACCCAGATATTATTCGTTACTTCATGACCATTCCAGAAGCTGCTCAGTTGGTGATTCAAGCAGG
CGCTATGGGTAAGGGTGGGGATGTGTTTGTATTGGATATGGGGGAACCCGTTAAGATTGTTGATCTGGCGAAGAATCTGA
TTCGTTTGTCTGGTTTGGAAGTGAAGTCCGATGCTAACCCAAATGGCGATATTGAAATTCAATTTACCGGGCTGCGTCCT
GGCGAGAAGCTTTTTGAAGAGTTATTGATTGGCGATAATGTAAAAGAAACCCAGCATAAACGTATTATGACGGCTAATGA
ACGGTTTTTATCCTTGCCTGATTTTGTTCAAACCATGGAGCAATTGGACAAAGCTTGCCATGATTTTGACCATGAAAAAG
TGCGTGAGATCTTGATTACGGCTCCAACCGATTTCCAGCCAACCGATGGTATTGGCGATTTGGTGTGGAATGCGAAAAAG
GCGTTAGATCAGCAAGTTGAAGATTCAAATGTTGTTCACTTGAAAGAGCATGTATCGTAG

Protein sequence :
MMIKKFDFLWSLPRFYKRLISLAVDSVFVYLAFVFAYWARLGEFSAFKGHSIWLVVAGTIAVTLLVNIKLGLYRAILRYL
TFHAFSAILVGAAISALSITSFAYFFEANIPRTVPIIYFPFLVMLCGGSRVLIRGLLTQAPQKGSESVLVFGAGSTGRQL
TLALRQASSYRVKGFIDRDESLANTIIQGVPVYNVDKIGELIEKYDIEKVLLAIPKASRSERKQVIEQLMPYPVEVLTVP
DFNDIVTGKAKVSELQDVAVDDLLGRDVVEPVASLMQANISGKVVMVTGAGGSIGSELCRQIIAQQPSTLIVFDVSEYAV
YQIDKELNEILEQESFNIKIVPLIGSVQRINRLASTMKAFGVNTVYHAAAYKHVPLVEYNVVEGVRNNAFGTYYSAKAAI
ESGVESFVLISTDKAVRPTNVMGATKRMAELGLQALAEAEAKKAAKQEKFTRFCMVRFGNVLGSSGSVIPVFKKQILENQ
PITVTHPDIIRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGEPVKIVDLAKNLIRLSGLEVKSDANPNGDIEIQFTGLRP
GEKLFEELLIGDNVKETQHKRIMTANERFLSLPDFVQTMEQLDKACHDFDHEKVREILITAPTDFQPTDGIGDLVWNAKK
ALDQQVEDSNVVHLKEHVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 8e-75 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmwyl1_0813 YP_001339682.1 polysaccharide biosynthesis protein CapD VFG0029 Protein 1e-118 47