Gene Information

Name : Mmwyl1_0521 (Mmwyl1_0521)
Accession : YP_001339392.1
Strain : Marinomonas sp. MWYL1
Genome accession: NC_009654
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 588146 - 589432 bp
Length : 1287 bp
Strand : +
Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pat:Patl_2863 TRAP dicarboxylate transporter, DctM subunit

DNA sequence : 
ATGGGCATTTCATTTTTCTGGATTTTGCTTTCTGTCATGTTTTTGGGGATGCCGGTTGCGTTTGCCTTGTTGTTTGCGCC
GGGTTTGAGTCTGTTTTTAGAAGGCAAAGAGATGTTTTATCTCTTGCTAACACAGCGTTTGTACAATGGTATTGATAGCT
TTCCCTTGATGGCGATTCCGTTTTTCATGTTGGCGGGTGAGGTGATGAACCGTAGCGGTATTACTTTATCGCTTGTTCAG
GTAAGCCAAGCCTTTATCGGGCATTTGCGTGGTGGTTTGGCGCAAATCAATATTTTATCTTCCATGTTGTTTGCGGGGCT
AAGTGGCTCGGCGGTAGCTGATTGTTCAGCGTTGGGAAAAATGCTGATTCCAGCGATGGAAAAGAATGGCTACTCGCGTC
GTTTTGCGGCGGCTGTGACGGCGGCATCATCGGTCATCGGACCGATTATTCCACCGAGTGGCATTATGATTTTGTATGCG
TTTGTGATGAACGTGTCGGTGGGTGGTTTGTTTGCAGCAGGTATTGTGCCGGGCGTTTTGGTGGGGGTTAGCTTGATGGC
AATGACGTGGTTTTTGGCGCGTCGTCGAGGCTATAAAGTGGCCTCTGAAAAGGCTTCTTGGTCAGAGCGTGGTACGGCAG
TTAAACAAGCTTTTTGGCCGTTGTTGACGCCAGTTATTTTGCTTGGCGGTATTTTATCTGGTGTGTTTACACCAACAGAA
GCGGCGGCGGTTGCGGCGGCTTATGCCTTGGTGGTCAGTCTGTTGTCGAAAACCATGACGGTGAGTAACTTGCCAAGCTT
GTTTTACGCAACGGCGAAATCGTCAGCGGTGATTTTATTCTTGGTGGGCAGTGCGGTGGCGTTTTCTTCCGTCATTAGTT
TGTCTGGAGCGCCACAAAAAGTCGCTGCAATCATGGTTTCTCTGACGGAAAATCCGTTGTTGCTTCTGTTGATTATTAAC
TTGCTGTTGTTGTTTGTTGGCATGTTCTTAGATGCAGGGCCTGCGATTCTTATTTTGGGGCCAATTCTTGGACCGATTGT
CACGCAATTTGGTATCGATCCTCTGCATTTTGCCATTGTGATGTGCGTGAACTTAACCATTGGTTTAACAACGCCGCCTA
TGGGCTTGGTGCTGTTTGTTGCGTCCAGTGTGAGTGGCGAGCGAGTTGAGACAATTAGCCGTGAAATGCTGCCTTATTTG
GCGGTCCATATCTTTGTTATTTTGCTCATTACCTATATCCCAGCATTAACGATGACCTTGCCTCGTTTGCTTGGCTTTGC
CTCCTAA

Protein sequence : 
MGISFFWILLSVMFLGMPVAFALLFAPGLSLFLEGKEMFYLLLTQRLYNGIDSFPLMAIPFFMLAGEVMNRSGITLSLVQ
VSQAFIGHLRGGLAQINILSSMLFAGLSGSAVADCSALGKMLIPAMEKNGYSRRFAAAVTAASSVIGPIIPPSGIMILYA
FVMNVSVGGLFAAGIVPGVLVGVSLMAMTWFLARRRGYKVASEKASWSERGTAVKQAFWPLLTPVILLGGILSGVFTPTE
AAAVAAAYALVVSLLSKTMTVSNLPSLFYATAKSSAVILFLVGSAVAFSSVISLSGAPQKVAAIMVSLTENPLLLLLIIN
LLLLFVGMFLDAGPAILILGPILGPIVTQFGIDPLHFAIVMCVNLTIGLTTPPMGLVLFVASSVSGERVETISREMLPYL
AVHIFVILLITYIPALTMTLPRLLGFAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-52 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 1e-52 41
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmwyl1_0521 YP_001339392.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 7e-53 41