Gene Information

Name : Mmwyl1_0045 (Mmwyl1_0045)
Accession : YP_001338923.1
Strain : Marinomonas sp. MWYL1
Genome accession: NC_009654
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 49860 - 51134 bp
Length : 1275 bp
Strand : +
Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_2978 TRAP dicarboxylate transporter-DctM subunit

DNA sequence :
ATGGAAGTCATTTTACTGTTTCTTGTATTCTTTTTGCTCCTCTTCGTAGGTGTGCCAATTGTTTTTTGCCTAGGTATAGC
TTCGCTTACTTATTTAACCATGGTAGGTATTCCGTTAACTATTGTGCCTCAGCGTTTATACGCTGGCATGGATTCCTTTG
TTTTACTGTGTATTCCTGGCTTTATTTTGGCTGGTAACCTAATGAACGTCGGTAATATTACCGATTATATTATTCGTTTC
AGTAATGCGTTATTAGGTCATATTCGTGGTGGTCTTGGGCTTGCGAATGTTGGTGGTTCGATGATTTTTGGTGGTATTTC
AGGTACTGCCGTAGCGGATACCGCGAGTATTGGTGCGGTAATGATTCCTGGTATGGCTCGAAGTGGTTATGACAAGCCGT
TTGCTGCAGCCGTAACCGCTGCGTCATCAACCATTGGGCCGATAATTCCACCCAGTGTGCCGATGATTATTGTTGGCTCC
TTAAGTGGTATTTCCGTCGGAAAAATGTTTTTGGCTGGTGTTGTGCCTGGTCTTATGTTGGGGCTAGCTATGATGATAAC
GGCTTATATTATCGCTGTTAAACGCCAGTATCCTCGAGAAAAGCGTGCCACGTTAAAAGAAATTTATATCGTTGGTAAAG
GTGCTTTCTGGGCGCTATTGATGACATTCATTATCCTGTACGGGATTATTGGTGGGCTCTTTACGCCAACCGAAGCGTCT
ATTATGGCCAGCCTATATGCTTTTGTTGTAGGTATGTTTGTCTATAAAGGTTTAACTTGGAAGAATCTTCCTAAGTTACT
AGTAGATACAGTACTGAGCTCAACCAGCTTGTTATTGCTGGTGGGCATGGCGAACTTATTTGGCTGGATTCTGACTAGCG
AACAAATTCCACAGATGTTGGCGAGTGCAATTTTTAGCATTAGCGAAAACCCATTTGTGGTGATTCTAATCATCAATATC
GTGTTGTTGATTGTTGGTGGTTTTATGGAAACCATTGCGGCTCTGATTATCCTTTTTCCTACTTTGTTGAAAGTGGCAGA
AGGTATTGGTATGGATCCGATTCATTTTGGCGTGATGGCAGTACTCAATTTGATTATCGGATTAACTACACCGCCTGTTG
GAGTCTGTTTATTTGTTGCTGCAGGAATCAGTGAGCTGCCAATGACAACCATTGTAAAAGCGATTTGGCCCTTCTTGCTC
TGTAACCTTTTTGTGCTTTTACTGGTTTCCTATATCCCAGCCATTTCATTGTGGCTGCCTTCCTTGTTGGGCTAA

Protein sequence :
MEVILLFLVFFLLLFVGVPIVFCLGIASLTYLTMVGIPLTIVPQRLYAGMDSFVLLCIPGFILAGNLMNVGNITDYIIRF
SNALLGHIRGGLGLANVGGSMIFGGISGTAVADTASIGAVMIPGMARSGYDKPFAAAVTAASSTIGPIIPPSVPMIIVGS
LSGISVGKMFLAGVVPGLMLGLAMMITAYIIAVKRQYPREKRATLKEIYIVGKGAFWALLMTFIILYGIIGGLFTPTEAS
IMASLYAFVVGMFVYKGLTWKNLPKLLVDTVLSSTSLLLLVGMANLFGWILTSEQIPQMLASAIFSISENPFVVILIINI
VLLIVGGFMETIAALIILFPTLLKVAEGIGMDPIHFGVMAVLNLIIGLTTPPVGVCLFVAAGISELPMTTIVKAIWPFLL
CNLFVLLLVSYIPAISLWLPSLLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 8e-50 43
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 8e-50 43
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 6e-50 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmwyl1_0045 YP_001338923.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 3e-50 43