Gene Information

Name : Mmwyl1_3609 (Mmwyl1_3609)
Accession : YP_001342446.1
Strain : Marinomonas sp. MWYL1
Genome accession: NC_009654
Putative virulence/resistance : Unknown
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4073075 - 4075657 bp
Length : 2583 bp
Strand : -
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: abo:ABO_0479 ATP-dependent Clp protease, ATP-binding subunit ClpB

DNA sequence :
ATGCGTATAGATCGTTTAACCAGTAAATTACAACTAGCACTTTCCGATGCCCAATCCGTTGCCCTTGGGCAAGATCACTC
CTATATTGAGCCACTTCATTTGATGATAGCTCTGTTGGATCAACAGGGGGGGAGTACTCGTCCAATTCTTCAGCAAGCAG
GTATTCCTGTTGCTAAATTCCGTGAGAGCCTGAATGATCTATTGTCTCGTCTTCCAAAAGTAAATGATCACGACGGCAAT
GTGCAGATGTCTCCAGAGTTGGGGCGATTGCTTAACCTAGCCGACAAAGAGGCACAGAAGCGAAAAGATCAATATATATC
TTCTGAGCTCGTGTTGATGGCGATGTTTGATGGTAAAGATGACCTTGCAAAAAGCTTAAAAGCAAGTGGCGTCACTAAGG
CAGATATTGCAGTGCTAATTGATAGTATTCGTGGTGGTGATTCGGTAAATGATCCTGATGCAGAGGAAAATCGTCAAGCA
TTAGATAAATACACCGTTGATTTAACCGCGAGAGCAGCAGAAGGTAAACTTGATCCTGTTATTGGTCGAGATGATGAAAT
ACGCCGTACGATTCAAGTTTTGCAGCGTCGCCGTAAGAATAACCCTGTTTTAATTGGTGAGCCAGGCGTGGGTAAGACCG
CCATCGTGGAAGGTTTAGCGCAGCGAATTATTAATGGCGAAGTGCCTGAAGGACTGAAAAATAAGCGTGTTTTATCTCTT
GATATGGCTGCTTTGATTGCTGGTGCTAAATATCGAGGTGAGTTTGAAGAGCGCCTAAAAGCTTTGCTTAATGAATTAGC
AAAACAAGAGGGCCAAGTAATTTTATTTATCGATGAAATCCATACTATGGTGGGGGCAGGTAAATCTGAAGGTTCAATGG
ACGCTGGTAACATGCTTAAACCAGCTCTTGCTCGCGGTGAGTTGCATTGTGTTGGCGCGACGACATTGGATGAGTATCGC
CAATTTATTGAAAAAGATGCAGCATTGGAAAGACGATTCCAAAAAGTACTGGTGGAAGAGCCAAGTGTATTGGATTCCAT
TGCTATTTTACGTGGTCTAAAAGAGCGCTATGAAGTCCATCATGGTGTTGATATTACCGACTCTGCCATTATTGCGGCCG
CTAAGCTTTCGCAGCGCTACATTACAGATCGTCAATTACCGGATAAGGCGATTGATTTGATTGATGAAGCAGGCAGCCGT
ATTCGTATGGAAATGGATTCTAAGCCAGAAGACATGGATCGTTTAGAGCGTCGCTTGATTCAATTGAAGATTGAAAAAGA
AGCGCTTAAAAAAGAAAAGGATAAAGCGTCTAAGCTTCGTTTAGAAGAGTTGGATGTTGAAATTGATAACTTGCAGAAAC
AGTTTTCTGATTTAGAAGAGATCTGGAATGCTGAAAAAGCTGCAGTTCAAGGTGCTCAAAAACTCAAAGAAGATCTTGAA
ACTGTGCGTCATGAAATGGAAGAAGCTCGTCGCAGTGGTAATTTAGCAAAAATGTCAGAGCTCCAATATGGCGTAATTCC
AATGTTAGAGGCTGAAATAGAAAAAGCCAGTAAGGCGGAAGAAACGACAGAAACGCGATTGCTGAAAAGGCGTGTTACTG
AGGAAGAGATTGCGACAGTTGTTTCGCGGTGGACTGGGATCCCTATAGATAAAATGTTGGAAGGCGAGCGAGATAAACTG
CTGCGCATGGAAGACGCGCTGCATGAATCAGTTATGGGTCAGGATGAAGCTGTTTTGGCGGTTTCTAACGCCGTTCGTCG
CTCTCGTTCTGGTTTGGCTGATCCGAATAGACCGAATGGCTCTTTTCTCTTCTTGGGCCCTACTGGTGTGGGGAAAACGG
AGTTGTGTAAATCTCTAGCGCGGTTCCTTTTTGATACTGAGCAGGCCATGGTTCGAATCGATATGTCTGAATTTATGGAA
AAACACTCTGTTGCTCGTTTGATTGGTGCGCCTCCAGGCTATGTAGGTTATGAAGAGGGGGGGTATCTGACTGAAGCGGT
AAGACGCCGACCTTATTCAGTGTTACTACTTGATGAAGTTGAAAAAGCGCATCCTGATGTTTTCAACATTCTTTTGCAGG
TTCTGGACGATGGTCGATTAACTGATGGGCAGGGGCGTACTGTAGACTTTAGAAACACTGTGATTGTTATGACGTCGAAC
TTGGGTTCTGATTTGATTCAAGAGTATCGGTCTGCTGATCAATATGAAGAAATTAAAGCGAAAGTGATGGAAGTGGTTGG
AATGCACTTCCGTCCTGAGTTTATTAACCGTATCGATGAGACTGTTGTTTTCCATCCATTGATGAAGTCACAAATTAAAG
GTATTGCTACAGTTCAGCTCTCGCATTTGAATGACAGATTAGCTGAAATGGGAATGTCTTTGGTGTTAACGGATGCCGCA
TCAGATCAGTTGGTTGAGGTGGGTTATGATCCTGTATACGGTGCTCGTCCGTTGAAACGTGCGATACAGAAATGGATAGA
AAACCCACTGGCAAATGAGTTGCTATCAGGGCATTTTGTCATGGGGGATAATATTGTCGCTGATGTTTCTGAAGGGGTGA
TTGGCTTCTCAAAAGCTAATTAG

Protein sequence :
MRIDRLTSKLQLALSDAQSVALGQDHSYIEPLHLMIALLDQQGGSTRPILQQAGIPVAKFRESLNDLLSRLPKVNDHDGN
VQMSPELGRLLNLADKEAQKRKDQYISSELVLMAMFDGKDDLAKSLKASGVTKADIAVLIDSIRGGDSVNDPDAEENRQA
LDKYTVDLTARAAEGKLDPVIGRDDEIRRTIQVLQRRRKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSL
DMAALIAGAKYRGEFEERLKALLNELAKQEGQVILFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEYR
QFIEKDAALERRFQKVLVEEPSVLDSIAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAGSR
IRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKLRLEELDVEIDNLQKQFSDLEEIWNAEKAAVQGAQKLKEDLE
TVRHEMEEARRSGNLAKMSELQYGVIPMLEAEIEKASKAEETTETRLLKRRVTEEEIATVVSRWTGIPIDKMLEGERDKL
LRMEDALHESVMGQDEAVLAVSNAVRRSRSGLADPNRPNGSFLFLGPTGVGKTELCKSLARFLFDTEQAMVRIDMSEFME
KHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSN
LGSDLIQEYRSADQYEEIKAKVMEVVGMHFRPEFINRIDETVVFHPLMKSQIKGIATVQLSHLNDRLAEMGMSLVLTDAA
SDQLVEVGYDPVYGARPLKRAIQKWIENPLANELLSGHFVMGDNIVADVSEGVIGFSKAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-162 44