Gene Information

Name : Mmwyl1_3461 (Mmwyl1_3461)
Accession : YP_001342299.1
Strain : Marinomonas sp. MWYL1
Genome accession: NC_009654
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3905590 - 3906966 bp
Length : 1377 bp
Strand : -
Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: psb:Psyr_0585 DnaB helicase

DNA sequence :
GTGCAACTAAATGATTCTGAAGTCGCTTCTATTAAATTACCACCGTATTCCATTGAGGCTGAGCGTTCAGTTGTTGGCGG
GTTGATGCTGGATCCCCAGGCTTGGGAGAAAGTATCAGAGCTTGTTATTGCTGATGATTTTTATCGTCCAGAGCATAAGG
CTATTTTTACTGTTATTGCTCGTTTAGCTGATGAGTCAGAACCTATTGATGTGGTTACCATTGGTGAGCGATTAGATAAG
CGTGGTGATCTAGAATCTATTGGTGGTATGGCGTATTTAATTGAGGTGGCTGAGGCAACTCCAAGTGCGTCTAACATCGC
GTCCTATGCGGATATTGTTCGAGAACGTTCTATCTTACGCCGTCTTATTTCTACAACAAATGATATTTCTGCACGAGCTT
TTCATCCAGAAGGCATGACAGCTGCTGAAGTATTGGATGAAGCTGAGCGAAAAATATTTCAAATCGCTGAAGGTGGAGAG
AAGAAAGGCGGGCCACGAATTGCGGCAGATATTCTTAGTGCTACAGTGGATAAAATCGATGAACTGTATCATCAAGATGG
AGCGATTACTGGATTAAGTACCGGTTTTACAGATTTAGATGCAATGACCGCAGGCTTGCAGCCTTCAGATTTGATTATCG
TAGCGGGTCGTCCTTCTATGGGTAAAACAACCTTTGCGATGAACTTGGTGGAAAATGCCGCCATGATTAGTGATAAGCCC
GTTATTGTATTCAGTTTGGAGATGCCTGCAGAATCACTCATGATGCGTATGCTGTCCTCTCTTGGCCGAATAGATCAGAC
GCGGATGCGATCTGGGCAGCTGGTTCAAGAAGACTGGGATAAGTTAATGTCAGCGGTAAAAATGCTGAAAGATCGTAAGC
TCTTTATTGATGACACGGGTGGTATTAGCCCTACAGAAATGCGTTCACGTGTGCGACGCATTGCTCGTGAACACGGTGGC
GTTGCAATGATCATGGTCGATTACCTTCAGTTGATGCAAATTCCAGGTTTCACGGAAGGTCGTACCAATGAAATTTCTGA
AATTTCCCGATCTCTAAAGGCGATAGCCAAAGAAATGGAGTGCCCAATGGTCGCTCTTTCTCAGCTTAACCGTAGTTTAG
AGAATCGACCTAATAAACGCCCAGTTAACTCTGATTTACGTGAATCTGGGGCAATTGAGCAGGATGCTGACGTTATTTCC
TTTGTATATCGAGATGAAGTTTATCATGAGGATACACCGCATAAAGGTATTGCAGAAATCATTATTGGTAAGCAGCGTAA
TGGTCCAATTGGTACTTGTCGACTTGCATTTGTGGGTAAATATACTCGCTTTGAAGATTTAGCACCGGATGCTTACCGAG
ATTTTGATGATGAATAA

Protein sequence :
MQLNDSEVASIKLPPYSIEAERSVVGGLMLDPQAWEKVSELVIADDFYRPEHKAIFTVIARLADESEPIDVVTIGERLDK
RGDLESIGGMAYLIEVAEATPSASNIASYADIVRERSILRRLISTTNDISARAFHPEGMTAAEVLDEAERKIFQIAEGGE
KKGGPRIAADILSATVDKIDELYHQDGAITGLSTGFTDLDAMTAGLQPSDLIIVAGRPSMGKTTFAMNLVENAAMISDKP
VIVFSLEMPAESLMMRMLSSLGRIDQTRMRSGQLVQEDWDKLMSAVKMLKDRKLFIDDTGGISPTEMRSRVRRIAREHGG
VAMIMVDYLQLMQIPGFTEGRTNEISEISRSLKAIAKEMECPMVALSQLNRSLENRPNKRPVNSDLRESGAIEQDADVIS
FVYRDEVYHEDTPHKGIAEIIIGKQRNGPIGTCRLAFVGKYTRFEDLAPDAYRDFDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 5e-110 53
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-97 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-97 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 6e-94 49
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-98 49
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 3e-95 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-90 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-90 43
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 6e-74 42