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Name : cmlA1 (KPN_pKPN5p08202) Accession : YP_001338812.1 Strain : Genome accession: NC_009651 Putative virulence/resistance : Resistance Product : chloramphenicol resistance protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 35447 - 36754 bp Length : 1308 bp Strand : - Note : - DNA sequence : TTGCTCTACGGGAGCGCCGCCAAATCCTTTGTTCAAGGAGATGGTTTCGTGCGCTCAAAAAACTTTAGTTGGCGGTACTC CCTTGCCGCCACGGTGTTGTTGTTATCACCGTTCGATTTATTGGCATCACTCGGCATGGACATGTACTTGCCAGCAGTGC CGTTTATGCCAAACGCGCTTGGTACGACAGCGAGCACAATTCAGCTTACGCTGACAACGTACTTGGTCATGATTGGTGCC GGTCAGCTCTTGTTTGGACCGCTATCGGACCGACTGGGGCGCCGCCCCGTTCTACTGGGAGGTGGCCTCGCCTACGTTGT GGCGTCAATGGGCCTCGCTCTTACGTCATCGGCTGAAGTCTTTCTGGGGCTTCGGATTCTTCAGGCTTGTGGTGCCTCGG CGTGCCTTGTTTCCACATTTGCAACAGTACGTGACATTTACGCAGGTCGCGAGGAAAGTAATGTCATTTACGGCATACTC GGATCCATGCTGGCCATGGTCCCGGCGGTAGGCCCATTGCTCGGAGCGCTCGTCGACATGTGGCTTGGGTGGCGGGCTAT CTTTGCGTTTCTAGGTTTGGGCATGATCGCTGCATCTGCAGCAGCGTGGCGATTCTGGCCTGAAACCCGGGTGCAACGAG TTGCGGGCTTGCAATGGTCGCAGCTGCTACTCCCCGTTAAGTGCCTGAACTTCTGGTTGTACACGTTGTGTTACGCCGCT GGAATGGGTAGCTTCTTCGTCTTTTTCTCCATTGCGCCCGGACTAATGATGGGCAGGCAAGGTGTGTCTCAGCTTGGCTT CAGCCTGCTGTTCGCCACAGTGGCAATTGCCATGGTGTTTACGGCTCGTTTTATGGGGCGTGTGATACCCAAGTGGGGCA GCCCAAGTGTCTTGCGAATGGGAATGGGATGCCTGATAGCTGGAGCAGTATTGCTTGCCATCACCGAAATATGGGCTTCG CAGTCCGTGTTAGGCTTTATTGCTCCAATGTGGCTAGTGGGTATTGGTGTCGCCACAGCGGTATCTGTGTCGCCCAATGG CGCTCTTCGAGGATTCGACCATGTTGCTGGAACGGTCACGGCAGTCTACTTCTGCTTGGGCGGTGTACTGCTAGGAAGCA TCGGAACGTTGATCATTTCGCTGTTGCCGCGCAACACGGCTTGGCCGGTTGTCGTGTACTGTTTGACCCTTGCAACAGTC GTGCTCGGTCTGTCTTGTGTTTCCCGAGTGAAGGGCTCTCGCGGCCAGGGGGAGCATGATGTGGTCGCGCTACAAAGTGC GGAAAGTACATCAAATCCCAATCGTTGA Protein sequence : MLYGSAAKSFVQGDGFVRSKNFSWRYSLAATVLLLSPFDLLASLGMDMYLPAVPFMPNALGTTASTIQLTLTTYLVMIGA GQLLFGPLSDRLGRRPVLLGGGLAYVVASMGLALTSSAEVFLGLRILQACGASACLVSTFATVRDIYAGREESNVIYGIL GSMLAMVPAVGPLLGALVDMWLGWRAIFAFLGLGMIAASAAAWRFWPETRVQRVAGLQWSQLLLPVKCLNFWLYTLCYAA GMGSFFVFFSIAPGLMMGRQGVSQLGFSLLFATVAIAMVFTARFMGRVIPKWGSPSVLRMGMGCLIAGAVLLAITEIWAS QSVLGFIAPMWLVGIGVATAVSVSPNGALRGFDHVAGTVTAVYFCLGGVLLGSIGTLIISLLPRNTAWPVVVYCLTLATV VLGLSCVSRVKGSRGQGEHDVVALQSAESTSNPNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 7e-160 | 99 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 1e-167 | 99 |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 4e-62 | 51 |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 3e-62 | 50 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 3e-62 | 50 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 4e-63 | 50 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 4e-63 | 50 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 4e-63 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cmlA1 | YP_001338812.1 | chloramphenicol resistance protein | DQ984668.gene.p01 | Protein | 4e-160 | 99 |
| cmlA1 | YP_001338812.1 | chloramphenicol resistance protein | DQ522237.1.gene4.p01 | Protein | 4e-160 | 99 |
| cmlA1 | YP_001338812.1 | chloramphenicol resistance protein | NC_010410.6003586.p0 | Protein | 4e-160 | 99 |
| cmlA1 | YP_001338812.1 | chloramphenicol resistance protein | AF294653.1.gene4.p01 | Protein | 4e-159 | 99 |
| cmlA1 | YP_001338812.1 | chloramphenicol resistance protein | AF156486.gene.p01 | Protein | 1e-156 | 98 |
