Gene Information

Name : KPN_pKPN4p07123 (KPN_pKPN4p07123)
Accession : YP_001338732.1
Strain :
Genome accession: NC_009650
Putative virulence/resistance : Virulence
Product : putative lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 71740 - 72225 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGGAGTAGCGTTTGGTATCATCCTGTCTTTAATACCATTGTCATCAATGGCAGCAGACTGCTTTGATATGGCTGG
CAGGGATTACAAAATTGATCCGGATCTCCTGCGTGCTATATCATGGCAAGAATCACGATTTAAAATTGATGCGATTGGGC
GTAATCCTGTTACGGGTTATGGATCAGGCTTGATGCAAATTGACTCGCAGCATTTCAACGAACTGTCGCGATATGGAATA
AAACCGGATCATCTTCTTAGCGATGCTTGTCTTAACATCTACACCGGAGCCTATTATCTGGCTCAGGCGTTTAAAAAGTG
GGGCGTTTCGTGGGATGCAGTCGGGGCATACAATGCAGGCTTCAAAAAGACCCCGCGCCAGGCAGCAAGACGTTACGAGT
ATGCGAAGAAGATCCATTACTACTACACGGCTATCAAAGCAAGCAAACGAACTTCTTCTAAAGATCAGAAAATCGCCATG
AACTAA

Protein sequence :
MKGVAFGIILSLIPLSSMAADCFDMAGRDYKIDPDLLRAISWQESRFKIDAIGRNPVTGYGSGLMQIDSQHFNELSRYGI
KPDHLLSDACLNIYTGAYYLAQAFKKWGVSWDAVGAYNAGFKKTPRQAARRYEYAKKIHYYYTAIKASKRTSSKDQKIAM
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-25 46
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 6e-25 46
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 6e-25 46
unnamed AAL57531.1 unknown Not tested LEE Protein 4e-25 46
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 4e-25 46
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 4e-25 46
unnamed AAC31524.1 L0045 Not tested LEE Protein 7e-25 45
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 7e-25 45
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 1e-24 45
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 1e-24 45
unnamed AAL06358.1 unknown Not tested LEE Protein 2e-25 44
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 5e-24 44
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 9e-25 44
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 6e-14 43
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 6e-14 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN_pKPN4p07123 YP_001338732.1 putative lytic transglycosylase VFG0823 Protein 3e-25 45
KPN_pKPN4p07123 YP_001338732.1 putative lytic transglycosylase VFG0719 Protein 2e-24 44