Gene Information

Name : KPN_pKPN3p06000 (KPN_pKPN3p06000)
Accession : YP_001338609.1
Strain :
Genome accession: NC_009649
Putative virulence/resistance : Virulence
Product : lytic transglycosylase-like protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 139855 - 140340 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGGAGCAGCGTTTGGTATCATCCTGTCTTTAATACCATTGTCATCAATGGCAGCAGACTGCTTTGATATGGCTGG
CAGGGATTACAAAATTGATCCGGATCTCCTGCGTGCTATATCATGGCAAGAATCACGATTTAAAATTGATGCGATTGGTC
GTAATCCTGTTACGGGTTATGGATCAGGCTTGATGCAAATTGACTCGCAGCATTTCAACGAACTGTCGCGATATGGAATA
AAACCGGATCATCTTCTTAGCGATGCTTGTCTTAACATCTACACCGGAGCCTATTATCTGGCTCAGGCGTTTAAAAAGTG
GGGCGTTTCGTGGGATGCAGTCGGGGCATACAATGCAGGCTTCAAAAAGACCCCGCGCCAGGCAGCAAGACGTTACGAGT
ATGCGAAGAAGATCCATTACTACTACACGGCTATCAAAGCAAGCAAACGAACTTCTTCTAAAGATCAGAAAATCGCCATG
AACTAA

Protein sequence :
MKGAAFGIILSLIPLSSMAADCFDMAGRDYKIDPDLLRAISWQESRFKIDAIGRNPVTGYGSGLMQIDSQHFNELSRYGI
KPDHLLSDACLNIYTGAYYLAQAFKKWGVSWDAVGAYNAGFKKTPRQAARRYEYAKKIHYYYTAIKASKRTSSKDQKIAM
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 6e-25 46
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 6e-25 46
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-25 46
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-25 46
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-25 46
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-25 46
unnamed AAC31524.1 L0045 Not tested LEE Protein 6e-25 45
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 6e-25 45
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 9e-25 45
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 9e-25 45
unnamed AAL06358.1 unknown Not tested LEE Protein 2e-25 44
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 5e-24 44
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 8e-25 44
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 6e-14 43
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 6e-14 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN_pKPN3p06000 YP_001338609.1 lytic transglycosylase-like protein VFG0823 Protein 3e-25 45
KPN_pKPN3p06000 YP_001338609.1 lytic transglycosylase-like protein VFG0719 Protein 2e-24 44