|
Name : serS (KPN_00925) Accession : YP_001334591.1 Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Genome accession: NC_009648 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1038711 - 1040003 bp Length : 1293 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCCCAATCTGCTGCGTACCGAGCCAGACGCAGTCGCAGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAACTTCGCGCGCTTGAAGAGCGTCGTAAAGTTCTGCAGGTGCAAACGGAAAACCTGCAGGCGGAGCGTAACTCCC GATCGAAATCCATTGGCCAGGCGAAAGCGCGCGGGGAAGACATCGAGCCATTACGCCTGGAAGTTAACAAGCTTGGCGAA CAACTGGATGCTGCAAAATCCGAGCTGGAAACGCTGCTGGCGGAAATTCGCGATATCGCGCTGGCGATCCCGAATATTCC TCATGATGATGTGCCGGTTGGTCGCGATGAAAACGACAACGTTGAAGTTAGCCGCTGGGGTACGCCGCGTCAGTTCGATT TTGAGGTGCGCGATCATGTGACGCTGGGTGAAATGCACGGGGGGCTGGATTTTGCCGCCGCCGTTAAGCTCACCGGCTCG CGCTTCGTGGTGATGAAAGGGCAGCTGGCCCGTCTGCACCGCGCCCTGGCGCAGTTCATGCTGGATCTGCACACCGAACA GCATGGCTACAGCGAAAACTATGTCCCGTACCTGGTAAACCAGGACACCCTGTATGGCACTGGCCAGCTGCCGAAATTCG CCGGCGACCTGTTCCATACCCGTCCGCTGGAAGAAGAGGCTGACAGCAGCAACTACGCGCTGATCCCGACGGCGGAAGTG CCGCTGACCAACCTGGTGCGCGATGAAATCATCGACGAAGACGATCTGCCGATCAAAATGACCGCCCATACGCCGTGCTT CCGCTCTGAAGCCGGTTCCTATGGCCGCGACACCCGCGGTCTGATCCGTATGCACCAGTTCGATAAAGTTGAAATGGTGC AGATCGTCCGCCCGGAAGACTCTATGGCCGCGCTGGAAGAGATGACCGGTCACGCCGAGAAAGTGCTGCAGCTGCTGGGC CTGCCGTACCGTAAGGTCGCGCTGTGCACCGGCGATATGGGCTTCAGCGCCTGCAAAACCTATGACCTCGAAGTATGGGT TCCGGCGCAAAACACTTATCGTGAGATCTCCTCCTGCTCCAACGTCTGGGATTTCCAGGCGCGTCGTATGCAGGCTCGCT GCCGCAGCAAGTCCGATAAGAAGACCCGTCTCGTTCATACCCTGAATGGTTCTGGCCTGGCAGTAGGTCGTACCCTGGTG GCGCTGATGGAAAACTATCAGCAGGCTGATGGCCGTATCGAGATCCCGGAAGTGCTGCGCCCGTATATGCGCGGCCTCGA ATATATCGGCTAA Protein sequence : MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGE QLDAAKSELETLLAEIRDIALAIPNIPHDDVPVGRDENDNVEVSRWGTPRQFDFEVRDHVTLGEMHGGLDFAAAVKLTGS RFVVMKGQLARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV ALMENYQQADGRIEIPEVLRPYMRGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-107 | 57 |
