Gene Information

Name : ybdN (KPN_00647)
Accession : YP_001334327.1
Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Genome accession: NC_009648
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 734990 - 736219 bp
Length : 1230 bp
Strand : -
Note : -

DNA sequence :
ATGGTCATGTCGTTTATTAAATATCCCTTACCGGAATCGGTGCTGCAGGCAACTGAGCAGCGGATCCAGTGGGTCATGGA
TAATTTTTCGCGCATCTGTGTCTCTTTTTCCGGGGGAAAAGATTCCACCGTTATGCTGCATTTAACCGCCCAGGCGGCGC
GGTTACAGGGGAAAAAAATCTGCGTGTTGTTTATTGACTGGGAAGCGCAGTTCTCCTGCACCATCGCCCACTGTGAAAAA
CTGCGTGCGCTGTATGCGGATGTCATCGAAACCTTTTACTGGGTCGCCCTACCGCTCACCACCCAAAATGCCCTGACGCA
GTATAAGCCGCAATGGCAATGCTGGGAGCCCGGAACCGAGTGGGTACGCCAGCCGCCGCCCTGGGCCATTACCCACCCGG
GCTATTTTTCATTTTATCAACCCGGAATGAGCTTTGAAGCCTTCGTCAGCCACTTCGCCGAGTGGTTTTCGCAGCGTCGT
CCCGCCGCCGTGCTGGTGGGCATTCGCGCCGACGAATCGCTAAATCGCTTTATGACGATTTCTTCACAGCGTAAACAGCG
CTTCGCCGACGATAAACCATGGACCACTTCAGCGCCGGGCGGCCACGCCTGGTACATCTACCCGCTCTATGACTGGAAAA
CCGCCGATATCTGGACCTGGTTTGCCAAAAGCGGCGAGCCCTATAACCCGTTGTACGATCTGATGTATCAGGCCGGGGTG
CCGCTGCGCTATATGCGCATTTGCGAACCGTTTGGTCCCGAGCAGCGCCAGGGGCTGTGGCTGTATCACGTGCTGGAACC
TGAGCGCTGGGCCGCGATGTGCCAGCGAGTGAGCGGCGCGCACAGCGGCGGGGTCTATGCCGGGCATGATAATCAGTTCT
ACGGTCATCGGAAAATCGACAAGCCCGACCACCTGACGTGGAAAAGCTACGCCCTGTTCCTGCTCGACAGCATGCCGGAA
ACCACCGCCGAGCACTACCGCAATAAAATCGCCGTCTACCTGCGCTGGTACCAGAAAAAAGGTATGGAGGATATTCCGGA
TACCCAACCTGCGGACATTGGCACCAAAGATATCCCATCCTGGCGGCGAGTCTGCAAAGTACTGCTCAATAACGATTACT
GGTGCCGTCAGCTTTCGTTTAGCCCAACCAAAAGCAGCCACTATCAGCGCTACCGTAAACGCATGGAAAAACATCGCCAA
CAATGGGGGATATTATGCAACAACAACTGA

Protein sequence :
MVMSFIKYPLPESVLQATEQRIQWVMDNFSRICVSFSGGKDSTVMLHLTAQAARLQGKKICVLFIDWEAQFSCTIAHCEK
LRALYADVIETFYWVALPLTTQNALTQYKPQWQCWEPGTEWVRQPPPWAITHPGYFSFYQPGMSFEAFVSHFAEWFSQRR
PAAVLVGIRADESLNRFMTISSQRKQRFADDKPWTTSAPGGHAWYIYPLYDWKTADIWTWFAKSGEPYNPLYDLMYQAGV
PLRYMRICEPFGPEQRQGLWLYHVLEPERWAAMCQRVSGAHSGGVYAGHDNQFYGHRKIDKPDHLTWKSYALFLLDSMPE
TTAEHYRNKIAVYLRWYQKKGMEDIPDTQPADIGTKDIPSWRRVCKVLLNNDYWCRQLSFSPTKSSHYQRYRKRMEKHRQ
QWGILCNNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-129 63
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-129 63
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 2e-128 63
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 7e-129 63
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-129 63
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 1e-128 63
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-129 63
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 1e-128 63
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 9e-129 62
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 9e-129 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybdN YP_001334327.1 hypothetical protein VFG1504 Protein 6e-130 63