|
Name : ribD (KPN_00366) Accession : YP_001334048.1 Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Genome accession: NC_009648 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 406809 - 407912 bp Length : 1104 bp Strand : + Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : ATGCAGGACGAAATGTACATGGCGCGTGCGCTGAAGCTTGCCGCGCGCGGTCGCTTTACTACCCATCCTAACCCTAACGT CGGCTGCGTCATTGTGAAAGACGGCGAGATCGTCGGCGAGGGGTTTCACTATCGCGCCGGCGAGCCGCATGCTGAAGTGC ACGCCCTGCGCATGGCTGGCGAAAAGGCGCGCGGCGCCACCGCCTACGTCACTCTTGAGCCCTGCAGCCACCATGGCCGT ACGCCGCCATGCTGCGATGCGCTGATTGCCGCCGGCGTCAGCCGCGTGGTCGCCGCGATGCAGGATCCGAACCCGCAGGT GGCGGGGCGCGGTTTGTATCGCCTGCAGCAGGCCGGCATTGAGGTCAGCCATGGGCTGATGATGAACGAAGCGGAAGCGC TGAATAAGGGCTTTCTGAAGCGGATGCGCACCGGTTTTCCCTGGGTGCAGCTGAAGCTGGGCGCCTCGCTGGACGGCCGC ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCCCCGCAGGCGCGACGCGACGTGCAGCGTCTGCGCGCCCAGAG CCATGCCATCCTGACCAGCAGCGCCACCGTGCTGGCGGACGATCCGGCGCTGACCGTGCGCTGGCAGGAGCTGAGCGCCG ATACCCAGGCGCTTTATCCCGAAGAGAATTTGCGCCAGCCGCTGCGCGTCGTCATCGACAGCCAGAACCGCGTCACGCCT GAGCATCGTATTGTGCAGCAGGCGGGGGAAACGCTGTTTGCCCGCCTGCGCGCCGATGCACGGCAGTGGCCGGAAAGCGC CCGCACGCTGCTGGTTCCGGAGCATAACGGCCATCTCGATCTGGTGCTGCTGATGATGCTGCTTGGCAAACAGCAGATCA ACAGCGTCTGGGTTGAGGCAGGGGCTACGCTTGCCGGGGCGCTGCTGCAGGCGGGCCTGGTCGACGAGCTTATCGTCTAT ATTGCGCCTAAACTGTTAGGCAATACGGCGCGTGGATTATGCGCGCTGCCGGGGCTTGAAGAGCTGAGCCAGGCCCCCCA TTTTAAATTCAATGAGATACGTCAGGTTGGCCCGGATGTCTGCCTGCATTTAACCACTGCGTGA Protein sequence : MQDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHHGR TPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGR TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP EHRIVQQAGETLFARLRADARQWPESARTLLVPEHNGHLDLVLLMMLLGKQQINSVWVEAGATLAGALLQAGLVDELIVY IAPKLLGNTARGLCALPGLEELSQAPHFKFNEIRQVGPDVCLHLTTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-56 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-56 | 48 |
