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Name : fimD (KPN_03290) Accession : YP_001336918.1 Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Genome accession: NC_009648 Putative virulence/resistance : Virulence Product : outer membrane protein; export and assembly of type 1 fimbriae Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3610777 - 3613389 bp Length : 2613 bp Strand : + Note : - DNA sequence : ATGTCACATCGGAAATATGGACTGGATCATTTAGGTTGCCGAACTGCCCGGCGCCTGGTATCTCCGGCGCTGGCGCTGTG GCTCTGCTCACAGCCGTTTGCCGCGCGGGCGGACCTCTATTTTAACCCCCGCTTTTTAGCTGACGATCCGGCGGCGGTGG CTGACCTGTCGGGATTTGAAAAAGGCCAGGAGGTTCCGCCAGGCACCTATCGCGTCGATATTTATCTCAACAATGGTTTT ATGACCACCCGGGACGTCACTTTCCAGGCCGATGCCCAGGGTCACGGTCTGTCACCCTGCCTGACGCGCGGCCAGCTGGC GAGCATGGGTGTGGATACCGGTCGGGTGCCGGGCATGGCGACGCTGGACAGCACGGCCTGCGTGCCGCTGACCACGCTTA TCAGCGAAGCTACCACGCGCTTCGACGTCGGACAGCAGCGCCTGTACCTCACCGTCCCCCAGGCATTTATGGGTAACCAT GCGCGCGGCTATATTCCGCCGGAGCTGTGGGATAACGGTATCACCGCCGGGCTGATTAACTATAACTTCACGGGCAATAA CGCCCATAACACCACAGGTGGCAGCAGCCGTTACGCCTATCTGAATCTACAGAGCGGCCTGAACATTGGCGCCTGGCGTC TGCGCGATAACAGCACCTGGAGCTACAGCAGCGGCGGTAGCACCTCATCCAACGAGAATCGCTGGCAGCACGTTAACAGC TGGCTTGAGCGGGACATCACGCCTCTGCGTTCGCGACTCACCCTAGGGGACAGCTACACCAACGGCGATGTCTTCGACGG GATCAACTTCCGCGGCGCCCAGCTGGCCTCCGACGACAATATGCTACCGGACAGCCAGAAAGGCTTTGCGCCGGTGATCC ACGGGATCGCCCGCGGCACGGCGCAGGTGTCAATCAGGCAAAACGGCTACGAAATCTACCAGAGCACAGTGCCGCCGGGA CCATTTACCATCGACGATCTCTACGCCGCGGGCAATGGCGGCGATCTGCAGGTCACGATCAAAGAAGCGGATGGCTCCCG CCAGGTCTTCAGCGTGCCCTGGTCAACGGTGCCGGTTCTCCAGCGTGAAGGCCATACCCGCTTCGCCCTCACCGCCGGGG AGTACCGCAGCGGCAACAGTCAGCAGGAAACGCCCGATTTTTTCCAGGGCACGGCCATGCATGGCCTGCCGGCAGGCTGG ACGCTCTACGGCGGCACCCAGCTGGCAGACCGCTATCGCGCCTTTAACCTTGGGGTGGGGAAAAACATGGGCTATTTCGG CGCCCTGTCGCTGGATATCACTCAGGCCAACGCCACCCTGGCTGACGACAGCGAACATCAGGGGCAGTCGGTGCGTTTTC TCTATAACAAATCCCTGGATGAGACCGGCACCAACCTGCAGCTGGTGGGCTACCGCTACTCTACCCGCGGCTATTATAAC TTTGCCGATACCACTTACCGCCGGATGAGCGGCTACAGTGTGGAAACCCAGGACGGCGTTATCCAGGTAAAACCGAAATT TACCGACTACTACAATCTGGCTTACAGCAAGCGCGGCAAGGTGCAGCTGAGCGTGACTCAGCAGTTGGGGCGCACCGCCA CCCTCTATCTCAGCGGTAGCCACCAGACCTATTGGGGCACCGACGATGCCGATGAGCAGCTGCAGGCCGGCCTCAACGCC GCCGTGGACGATATCAACTGGTCGCTAAGCTACAGCCTGACAAAAAACGCCTGGCAGCAGGGGCGCGATCAAATGCTGGC GATCAATATCAATATCCCCTTCAGCCACTGGCTGCGTTCCGACAGCCGCTCGGTCTGGCGGCACGCCAGCGCCAGCTACA GCCTGTCGCACGATCTCAATGGCCGCATGACCAATCTGGCGGGCCTGTACGGCACCCTGCTGGAAGACAACAACCTCAGC TATAGCGTGCAGACCGGCTATGCCGGCGGCGGCAACGGCGACAACGGGAGCACAGGCTACACCGCCCTCAACTACCGCGG CGGCTACGGCAACGCCAACGTCGGCTACAGCCGCAGCGATGGCTTTAAACAGCTCTACTACGGGGTCAGCGGCGGCGTGC TGGCGCACGCCAACGGCATCACCCTGAGCCAACCGTTAAACGATACCGTGGTGCTGGTGAAAGCCCCCGGCGCCGGCGGC GTGAAAGTGGAAAACCAGACCGGGGTACGCACCGACTGGCGCGGGTATGCCGTCCTGCCTTATGCCACTGAGTATCGCGA AAACCGGATCGCGCTGGATACCAACACCCTGGCGGACAATGTCGACCTTGACGATGCGGTGGTCAGCGTGGTGCCCACCC ATGGGGCGATTGTCCGCGCCAACTTTAACGCCCAGGTGGGGATGAAGATCCTGATGACGCTGACCCATCGCGGCAAACCG GTGCCGTTTGGCGCCCTCGCCACCGGCGACAGCAACCAGAGCGGCAGCATCGTCGCGGACAACGGCCAGGTCTACCTGAG CGGGATGGCGCTGGCGGGCAAAGTGCGGGTGAAATGGGGCGATGGCCCGGACGCTCAGTGCGTGGCCGATTACCGTCTGC CGCCGGAGAGCCAGCAGCAGGCGCTCAGTCAGCTTTCGGTCGCGTGCCGCTAA Protein sequence : MSHRKYGLDHLGCRTARRLVSPALALWLCSQPFAARADLYFNPRFLADDPAAVADLSGFEKGQEVPPGTYRVDIYLNNGF MTTRDVTFQADAQGHGLSPCLTRGQLASMGVDTGRVPGMATLDSTACVPLTTLISEATTRFDVGQQRLYLTVPQAFMGNH ARGYIPPELWDNGITAGLINYNFTGNNAHNTTGGSSRYAYLNLQSGLNIGAWRLRDNSTWSYSSGGSTSSNENRWQHVNS WLERDITPLRSRLTLGDSYTNGDVFDGINFRGAQLASDDNMLPDSQKGFAPVIHGIARGTAQVSIRQNGYEIYQSTVPPG PFTIDDLYAAGNGGDLQVTIKEADGSRQVFSVPWSTVPVLQREGHTRFALTAGEYRSGNSQQETPDFFQGTAMHGLPAGW TLYGGTQLADRYRAFNLGVGKNMGYFGALSLDITQANATLADDSEHQGQSVRFLYNKSLDETGTNLQLVGYRYSTRGYYN FADTTYRRMSGYSVETQDGVIQVKPKFTDYYNLAYSKRGKVQLSVTQQLGRTATLYLSGSHQTYWGTDDADEQLQAGLNA AVDDINWSLSYSLTKNAWQQGRDQMLAININIPFSHWLRSDSRSVWRHASASYSLSHDLNGRMTNLAGLYGTLLEDNNLS YSVQTGYAGGGNGDNGSTGYTALNYRGGYGNANVGYSRSDGFKQLYYGVSGGVLAHANGITLSQPLNDTVVLVKAPGAGG VKVENQTGVRTDWRGYAVLPYATEYRENRIALDTNTLADNVDLDDAVVSVVPTHGAIVRANFNAQVGMKILMTLTHRGKP VPFGALATGDSNQSGSIVADNGQVYLSGMALAGKVRVKWGDGPDAQCVADYRLPPESQQQALSQLSVACR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 81 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD | YP_001336918.1 | outer membrane protein; export and assembly of type 1 fimbriae | VFG0876 | Protein | 0.0 | 80 |
| fimD | YP_001336918.1 | outer membrane protein; export and assembly of type 1 fimbriae | VFG1645 | Protein | 0.0 | 67 |
| fimD | YP_001336918.1 | outer membrane protein; export and assembly of type 1 fimbriae | VFG0912 | Protein | 0.0 | 67 |
| fimD | YP_001336918.1 | outer membrane protein; export and assembly of type 1 fimbriae | VFG0446 | Protein | 5e-172 | 49 |
| fimD | YP_001336918.1 | outer membrane protein; export and assembly of type 1 fimbriae | VFG0454 | Protein | 2e-155 | 44 |
