Gene Information

Name : fimC (KPN_03289)
Accession : YP_001336917.1
Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Genome accession: NC_009648
Putative virulence/resistance : Virulence
Product : periplasmic chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3610009 - 3610695 bp
Length : 687 bp
Strand : +
Note : required for type 1 fimbriae

DNA sequence : 
ATGGCGCATGGCTTACTGGCAGGATGTGTGCTTTTCGCCGCCAGTATCTTTAGCGCCAGCGCGCAGGCGGGCGTTGCGCT
TGGCGCGACCCGGGTTATCTACCCGGCGGGACAGAAGCAGGTCCAGCTCTCGGTGACCAATAATGATGACAACAGTACCT
GGCTTATTCAGTCATGGGTGGAAAATGCCGATGGTCAGCGAGACGGCCGGTTTGTCATCACTCCTCCGCTGTTTGCCATG
CAGGGTAAAAAAGAGAACACCCTGCGCATTATCGACGCCACCAATAACCAGCTGCCGCAGGATCGGGAAAGTCTGTTCTG
GATGAACGTGAAGGCGATCCCTTCGATGGATAAATCAAAGCTCAGCGACAATACCCTGCAGCTGGCGATTATCAGCCGCA
TCAAGCTCTACTACCGTCCGGGAAAACTGGCCCTGCCTCCGGATCAAGCGGCGGAAAAGCTGACCTTTAGCCGTAGCGGA
TCGTCGCTGACGCTGACGAACCCCACCCCCTATTACCTGACGGTGACCGAACTGAACGCCGGGACACGCATTCTGGAGAA
CGCCCTCGTACCGCCGATGGGCAAAACCAGCGTCAAGCTACCCGCGGATGCCGGGAACACCATCACCTATCGCACGATTA
ATGATTACGGCGCGCTGACGCCGAAAATGAATGGCGTGCTGCGCTAA

Protein sequence : 
MAHGLLAGCVLFAASIFSASAQAGVALGATRVIYPAGQKQVQLSVTNNDDNSTWLIQSWVENADGQRDGRFVITPPLFAM
QGKKENTLRIIDATNNQLPQDRESLFWMNVKAIPSMDKSKLSDNTLQLAIISRIKLYYRPGKLALPPDQAAEKLTFSRSG
SSLTLTNPTPYYLTVTELNAGTRILENALVPPMGKTSVKLPADAGNTITYRTINDYGALTPKMNGVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-78 92
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-61 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimC YP_001336917.1 periplasmic chaperone VFG0875 Protein 2e-77 84
fimC YP_001336917.1 periplasmic chaperone VFG0911 Protein 4e-62 70
fimC YP_001336917.1 periplasmic chaperone VFG1644 Protein 7e-62 70
fimC YP_001336917.1 periplasmic chaperone VFG0445 Protein 1e-44 50