Gene Information

Name : sitB (KPN_03079)
Accession : YP_001336710.1
Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Genome accession: NC_009648
Putative virulence/resistance : Virulence
Product : iron transporter: fur regulated
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3376419 - 3377240 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGCAGCGCAAGCGGGACTGTATGTCGACCAGCTCACCGTCACCTGGCGTAACGGCCACACTGCCCTGCGCGACGC
CTCGTTCAGCGTGCCGCGCGGCTCCATTGCCGCGTTGGTGGGGGTTAACGGCTCGGGTAAATCCACGCTGTTTAAAGCGC
TGATGGGCTTTGTCCGCGTTGGTCACGGCGAGATCGCCATACTCGGCCAGCCGGTCAACCGCGCGCTGCGCCAGAACCTG
GTCGCCTATGTCCCGCAGTCGGAAGAGATGGACTGGTCCTTCCCGGTGCTGGTGGAGGATGTGGTGATGATGGGCCGCTA
CGGCCATATGGGCTGGCTGCGGCGGGCAAAGCCGCGCGATCGCGAGATTGTCGATGCCGCGCTGGCCCGCGTGGGCATGA
GCGAGTTCCGCCATCGGCAGATTGGCGAGCTCTCTGGCGGGCAGAAAAAGCGCGTCTTTCTTGCCCGCGCCATCGCTCAG
CAGGGTCAGGTGATCCTGCTGGATGAACCTTTCACCGGCGTCGATGTGCAGACCGAAGCGCGGATCATCAGCCTGCTGCG
CGAGCTCCGCGATGAGGGCTGTACCATGCTGGTCTCCACCCACAACCTCGGGTCAGTGAGTGAATTTTGTGATTATACGG
TGATGGTGAAAGGCACCGTGCTGGCCAGCGGCCCGACAGAAACCACCTTCACTGCCGAGAATCTGGAGCGGGCTTTCAGC
GGCGTGCTGCGCCACGTCGCGCTCACAGGCGGGGAAGCGCAGGTTATCACCGATGACGAGCGGCCGTTTATCAGCCGGCG
CGCGGCGGGAGGCCCACGATGA

Protein sequence : 
MNAAQAGLYVDQLTVTWRNGHTALRDASFSVPRGSIAALVGVNGSGKSTLFKALMGFVRVGHGEIAILGQPVNRALRQNL
VAYVPQSEEMDWSFPVLVEDVVMMGRYGHMGWLRRAKPRDREIVDAALARVGMSEFRHRQIGELSGGQKKRVFLARAIAQ
QGQVILLDEPFTGVDVQTEARIISLLRELRDEGCTMLVSTHNLGSVSEFCDYTVMVKGTVLASGPTETTFTAENLERAFS
GVLRHVALTGGEAQVITDDERPFISRRAAGGPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-106 82
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-106 82
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-107 82
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-107 82
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-107 82
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_001336710.1 iron transporter: fur regulated BAC0350 Protein 8e-108 82
sitB YP_001336710.1 iron transporter: fur regulated BAC0440 Protein 2e-78 62
sitB YP_001336710.1 iron transporter: fur regulated BAC0400 Protein 7e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_001336710.1 iron transporter: fur regulated VFG0526 Protein 8e-108 82
sitB YP_001336710.1 iron transporter: fur regulated VFG1496 Protein 6e-25 41