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Name : hofB (KPN_00109) Accession : YP_001333799.1 Strain : Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Genome accession: NC_009648 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 127520 - 128905 bp Length : 1386 bp Strand : - Note : involved in biogenesis of fimbriae (type IV pilin), protein transport, DNA uptake DNA sequence : ATGAAAACAGAACAGCTGATCCCTCTCTGCCGTCGCTACCACGCCATGCTGCTGCATAGCGATGAACAGACAATCTCTAT TGCGGTGGTTAATACCCCGCCGGCGGAGTTAATGGAGGCGCTACGCTTCGCGACGCAAAAGCGGATCGACATTGAATGCT GGAGCCAGGAGCAGATGGATAAGCGTCTGCAGGCCCAGGAAAAGCAGGCGCAACTGGCGCAGAACGACGGGCCGGAAAAT ATCGCCGAACGGGTCAACCAGATCCTCGAACAGGCCCTGCGTCAGCGGGCGTCTGATATTCATATCGAGCCCACGGAAAC GCACTTACGCATCCGCCTGCGGGTCGATGGCGTCCTTCACGCCCTACCGTTGCTGGCTCCCGAACTGGCCGCACCGGTTA TCGCGCGACTCAAGGTCCTGGCCAGTCTCGATATCGCCGAGCACCGTTTACCGCAGGATGGCCAGTTCGCGCTGAATCTT GCGGGACGACCGCTCTCTTTTCGCATCGCCACTCTGCCCTGCCGCTATGGCGAAAAGATTGTCCTGCGCCTTCTGCATCA GGTTGACCAGGCGCTGGATCTGGAAGCACTCGGACTCTCATCCTCCCAGCTGGCGGCCTTTCGCCAGGCGCTGAACCAGC CGCAGGGTCTGCTGCTGGTCACCGGCCCAACCGGAAGCGGGAAAACGGTGACCCTCTACAGCGCCCTGCAGGCCAGAAAC CGTGAGCAAGTGAATATCTGTAGCGTGGAGGATCCACTGGAGATCCCCATCGCCGGGATGAACCAGACGCAAATCAATCC CCGCGCCGGACTCACTTTTCACAGTGTGCTGCGCGCCCTGTTACGCCAGGATCCGGATATTGTCATGGTGGGCGAGATCC GCGATGCCGAGACCGCTGAAATCGCGCTCAAAGCCGCCCAGACCGGTCATCTGGTGCTCTCCACCCTGCACACCAATTCC ACCAGCGAAACCCTGACCCGCCTGCAGCAAATGGGCATCGCCCGCTGGATGATTTCCTCTGCGCTCTCGCTGGTCATCGC CCAGCGTCTGGTCCGCAAGCTGTGTCCCCACTGTCGGCGTAATGCCGGCAGCGCCGCCGACCTGCCGCACAGCCTGTGGC CCCGCCCGCTGCCACGCTGGCAGGCAGCGGGCTGCGAACATTGTTACCACGGATATTACGGCCGGCTGGCGCTGTTCGAA GTGCTGCCTGTTACCCCCGGGCTACGCCAGGGGATAGTCCAGGGACTTAACGCCATTGAGATTGAATCTCTGGCGCGAGC CGCGGGGATGATGACGCTTTTTGAAAGCGGCTGTCAGGCTATCGAACAGGGATTGACCAGCCTCGAAGAGGTGGTGCGGG TGCTGGGGATCCCCCATGGCGACTAA Protein sequence : MKTEQLIPLCRRYHAMLLHSDEQTISIAVVNTPPAELMEALRFATQKRIDIECWSQEQMDKRLQAQEKQAQLAQNDGPEN IAERVNQILEQALRQRASDIHIEPTETHLRIRLRVDGVLHALPLLAPELAAPVIARLKVLASLDIAEHRLPQDGQFALNL AGRPLSFRIATLPCRYGEKIVLRLLHQVDQALDLEALGLSSSQLAAFRQALNQPQGLLLVTGPTGSGKTVTLYSALQARN REQVNICSVEDPLEIPIAGMNQTQINPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIALKAAQTGHLVLSTLHTNS TSETLTRLQQMGIARWMISSALSLVIAQRLVRKLCPHCRRNAGSAADLPHSLWPRPLPRWQAAGCEHCYHGYYGRLALFE VLPVTPGLRQGIVQGLNAIEIESLARAAGMMTLFESGCQAIEQGLTSLEEVVRVLGIPHGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-73 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-73 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_001333799.1 | hypothetical protein | VFG2048 | Protein | 9e-75 | 49 |
| hofB | YP_001333799.1 | hypothetical protein | VFG2426 | Protein | 5e-72 | 47 |
| hofB | YP_001333799.1 | hypothetical protein | VFG0182 | Protein | 5e-69 | 47 |
