Gene Information

Name : NWMN_1926 (NWMN_1926)
Accession : YP_001332960.1
Strain : Staphylococcus aureus Newman
Genome accession: NC_009641
Putative virulence/resistance : Virulence
Product : truncated beta-hemolysin
Function : -
COG functional category : R : General function prediction only
COG ID : COG3568
EC number : -
Position : 2132278 - 2133102 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAAT
ATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGAATATCCTTATCAAACACCTG
TACTCGGCCGTTCTCAATCAGGGTGGGACAAAACTGAAGGTAGCTACTCATCAACTGTTGCAGAAGATGGTGGCGTAGCG
ATTGTAAGTAAATATCCTATTAAAGAAAAAATCCAGCATGTTTTCAAAAGCGGTTGTGGATTCGATAATGATAGCAACAA
AGGCTTTGTTTATACAAAAATAGAGAAAAATGGTAAGAACGTTCACGTTATCGGTACACATACACAATCTGAAGATTCAC
GTTGTGGTGCTGGACATGATCGAAAAATTAGAGCTGAACAAATGAAAGAAATCAGTGACTTTGTTAAAAAGAAAAATATC
CCTAAAGATGAAACGGTATATATAGGTGGCGACCTTAATGTCAATAAAGGCACTCCAGAGTTCAAAGATATGCTTAAAAA
CTTGAATGTAAATGATGTTCTATATGCAGGTCATAATAGCACATGGGACCCTCAATCAAATTCAATTGCGAAATATAATT
ACCCTAATGGTAAACCAGAACATTTAGACTATATATTTACAGATAAAGATCATAAACAACCAAAACAATTAGTCAATGAA
GTTGTGACTGAAAAACCTAAGCCATGGGATGTATATGCGTTCCCATATTACTACGTTTACAATGATTTTTCAGATCATTA
CCCAATCAAAGCCTATAGTAAATAG

Protein sequence : 
MYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVA
IVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNI
PKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNE
VVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 1e-124 100
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-124 100
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-123 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 8e-68 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NWMN_1926 YP_001332960.1 truncated beta-hemolysin VFG1798 Protein 2e-126 99
NWMN_1926 YP_001332960.1 truncated beta-hemolysin VFG0674 Protein 4e-68 57