Gene Information

Name : NWMN_1896 (NWMN_1896)
Accession : YP_001332930.1
Strain : Staphylococcus aureus Newman
Genome accession: NC_009641
Putative virulence/resistance : Unknown
Product : phage major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2109393 - 2110538 bp
Length : 1146 bp
Strand : -
Note : major capsid protein for bacteriophage phiNM3

DNA sequence :
ATGACTATAAATTTATCGGAAACATTCGCAAATGCGAAAAACGAATTTATTAATGCAGTAAACAACGGTGAACCGCAAGA
AAGACAAAATGAATTGTACGGTGACATGATTAACCAACTATTTGAAGAAACTAAATTACAAGCAAAAGCAGAAGCTGAAA
GAGTTTCTAGTTTACCTAAATCAGCACAATCTTTGAGTGCAAACCAAAGAAGTTTCTTCATGGATATCAATAAAAACGTT
AACTATAAAGAAGAAAAACTTTTGCCAGAAGAAACAATTGATAGAATTTTTGAAGATTTGACGACGAATCATCCGTTATT
AGCTGATTTAGGTATTAAAAACGCTGGTTTGCGTTTGAAGTTCTTAAAATCTGAAACTTCTGGCGTAGCCGTTTGGGGTA
AAATCTATGGTGAAATTAAAGGTCAATTAGATGCTGCGTTCAGTGAAGAAACAGCAATTCAAAATAAATTGACAGCGTTT
GTTGTTTTACCAAAAGATTTAAATGATTTTGGTCCTGCGTGGATTGAAAGATTTGTTCGTGTTCAAATCGAAGAAGCATT
TGCAGTGGCGCTTGAAACTGCGTTCTTAAAAGGTACTGGTAAAGACCAACCAATCGGCTTAAACCGTCAAGTACAAAAAG
GTGTATCGGTAACTGAGGGTGCTTATCCAGAGAAAGAAGAACAAGGTACGCTTACATTTGCTAATCCGCGCGCTACGGTT
AATGAATTGACGCAAGTGTTTAAATACCACTCAACTAACGAGAAAGGTAAATCAGTAGCGGTTAAAGGTAATGTAACAAT
GGTTGTTAATCCGTCCGATGCTTTTGAGGTTCAAGCACAGTATACACATTTAAATGCAAATGGCGTATATGTTACTGCTT
TACCATTTAATTTGAATGTTATCGAGTCTACAGTCCAAGAAGCAGGTAAGGTTTTAACGTACGTTAAAGGTTTATATGAT
GGTTATTTAGCTGGTGGTATTAATGTTCAGAAATTTAAAGAAACACTTGCGTTAGATGATATGGATTTATACACTGCAAA
ACAATTTGCTTACGGCAAAGCGAAAGATAATAAAGTTGCTGCTGTTTGGAAATTAGATTTAAAAGGACATAAGCCAGCTT
TAGAAGGTACCGAAGAAACACTATAA

Protein sequence :
MTINLSETFANAKNEFINAVNNGEPQERQNELYGDMINQLFEETKLQAKAEAERVSSLPKSAQSLSANQRSFFMDINKNV
NYKEEKLLPEETIDRIFEDLTTNHPLLADLGIKNAGLRLKFLKSETSGVAVWGKIYGEIKGQLDAAFSEETAIQNKLTAF
VVLPKDLNDFGPAWIERFVRVQIEEAFAVALETAFLKGTGKDQPIGLNRQVQKGVSVTEGAYPEKEEQGTLTFANPRATV
NELTQVFKYHSTNEKGKSVAVKGNVTMVVNPSDAFEVQAQYTHLNANGVYVTALPFNLNVIESTVQEAGKVLTYVKGLYD
GYLAGGINVQKFKETLALDDMDLYTAKQFAYGKAKDNKVAAVWKLDLKGHKPALEGTEETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 2e-174 100
SAUSA300_1938 YP_494589.1 phi77 ORF006-like protein capsid protein Not tested ¥ÕSa3 Protein 2e-174 100
SAKOR_01942 YP_008492130.1 Major capsid protein Not tested ¥ÕSa3 Protein 2e-174 100
SAV1963 NP_372487.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-174 100
SA1774 NP_375072.1 hypothetical protein Not tested ¥ÕSa3 Protein 2e-174 100
SAOV_1104 YP_005736599.1 Phage major capsid protein Not tested ¥ÕSa2 Protein 7e-166 93
SH1772 YP_253687.1 hypothetical protein Not tested ¥ÕSh1 Protein 2e-84 49