Gene Information

Name : MmarC7_0235 (MmarC7_0235)
Accession : YP_001329456.1
Strain : Methanococcus maripaludis C7
Genome accession: NC_009637
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 247955 - 248155 bp
Length : 201 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; KEGG: mmp:MMP0993 putative transcriptional regulator

DNA sequence :
ATGAAAACAAGAATAAAGGAATATCGGGCAAAGTACGACATGACTCAGGAAGAACTTGGAAAACTTGTTGGGGTTAGGAG
AGAAACGATAAGTTTTCTCGAAAAAGGAAAATATAATCCTTCCTTAAAACTTGCCCATTTAATATCAAAAGCGCTGAATG
CAACAATAGACGAACTGTTCATTTTTGAAAATGATGAATAA

Protein sequence :
MKTRIKEYRAKYDMTQEELGKLVGVRRETISFLEKGKYNPSLKLAHLISKALNATIDELFIFENDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-08 47
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-05 41
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-05 41
unnamed ABJ97303.1 regulatory protein with helix turn helix motif Not tested SaPI2 Protein 1.9 41
SAV2026 NP_372550.1 hypothetical protein Not tested vSa4 Protein 2.7 41
SA1833 NP_375134.1 hypothetical protein Not tested vSa4 Protein 2.7 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC7_0235 YP_001329456.1 XRE family transcriptional regulator VFG2168 Protein 7e-06 41
MmarC7_0235 YP_001329456.1 XRE family transcriptional regulator VFG2175 Protein 7e-06 41