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Name : MmarC7_0017 (MmarC7_0017) Accession : YP_001329240.1 Strain : Methanococcus maripaludis C7 Genome accession: NC_009637 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 24236 - 27334 bp Length : 3099 bp Strand : - Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: aba:Acid345_3755 type I site-specific deoxyribonuclease, HsdR family DNA sequence : ATGTCTAATTTATGTGAAGATACGATTGAACAGGGGACTCTTGAGCTTTTAGAAAGTATTGGATACGAAATAATTTCCGG TCCTGAAATTGCGCCTGATGGCACTTCTCCAGAACGTAAAGATTATTCTGAAGTTGTACTTGTTTCTCGCCTTAGAAACG CAATTTCAAGAATAAATCCAAAAGTTCCAGAGGTTGCAAGGGAAGATGCACTTCGAAAAGTCCTGAGGCTTGAAAATCCA AATTTACTCATGAATAACGAGAAGTTTCACGAGTTTATATTTAAGGGAATTGATGTAGAATATCCAATTGATGGAAGAGT TAAGGGAGATAAGGTTTACTTACTCGATAAAAACCCGTTAAAAAACGAATTTGTTGCAGTAAACCAGTTTACAATCATTC AGAATAATAAAAACAGGCGGCCAGATATCGTTATATTTGTAAATGGGCTTCCACTTTCTGTAATCGAACTTAAAAATCCT ACAAAAGAAGATGCTACAATTTGGAGTGCTTATAACCAAATTCAAACGTATAAATCGGAAATTTCAGAACTTTTTAAGTA TAACGAGCTTATCCTAATTTCTGATGGTACGGAATCGCGAATAGGTACGCTTTCTTCAAATAAAGAATGGTTTTTACCGT GGAAATCAATTGATGGAACTTCTGAAATTAATAATGGAGTAAGCCAGCTAAAGATTTCAATTCTTGGAATGTTTGATAAA ACGCGGTTTATTGACATAATAAAGAATTTTATTGTTTTTAAAAAGGATGGAAAAGACATTATAAAAGTTATTGCAGGATA CCACCAGTATTTTGCGGCAAATCGTGCAATTGAAAAAACTATTGAAGCAGTTTCGGGAAATCGCCGGTGTGGTGTTGTAT GGCATACACAAGGGTCTGGAAAAAGTCTTACAATGGCATTTTATGCGGGAAAACTTGCGATTACTCCAGAACTTAAAAAT CCTACAATCGTAGTTGTAACTGATAGGAATGACCTTGACGACCAGCTGTTTGGAACGTTTGCGTCATGTATTGATGTATT AAAACAGACTCCTGTTCAGGCAAAAAATGCAGAAGACTTAAAGGAACAATTGAAAGTTGTATCGGGTGGAGTAATCTTTA CAACGATGCAGAAGTTTTCTGTTGATGAACTTAATGCAAAATATCCAATGCTTTCTGATCGAGAAAACATAATCGTGATG GCTGATGAAGCTCACAGGAGCCAGTACGGACTTAAAGCGAGATCTGTTGAGAAAAACGGTGAAGTTGGTATAACTTATGG TTTTGCTAAATATTTGCGTGATGCGCTACCAAATGCTTCATTTATTGGATTTACAGGAACTCCGATAGACTTTGAAGATA AAAGCACCCGTTCGATATTTGGTGAATATATCGATATTTACGATGTAAGACGGGCAGTTGCTGATGGTAGAACTGTAAAA ATCTACTATGAAAGCCGTGTTGCAAAAATCGGAATTGAAAACGACGTTCTTGCTAAACTTGATGCAGAATTTGAGGAAGT TACCGAATTTGAAGAAAATTATAAAAAAGAGAAATTAAAGGGCAAATGGGCACAGCTTGAAGCGATTGTTGGAAGCAATG ACAGGATTTCAAACGTTGCACAGGATATTGTCAATCATTTTGAAAAACGGGAAGAAACGCTTAGTGGAAAAGCAATCGTT GTATGCATGAGCAGGCGAATTTGCGTTGACCTTTATGACGAAATTATTCGTTTACGGCCTGAGTGGCATAATGACGATGA CAAACTCGGTGTTTTAAAAGTTATAATGACCGGTTCTGCGGCTGATGGCACAGAATGGCAAAAACACATAAGGACAAAAG GAAAACGAAAAGAGCTTGCTGACCACTTTAAAGATTCTGAAAGCGAATTTAAAATTGCGATTGTTCGTGATATGTGGCTT ACTGGCTTTGATGTTCCGTGTTTACACACACTTTACATCGATAAGCCTATGAAAGGGCACGGATTAATGCAGGCGATTGC AAGGGTAAACAGGGTGTTTAGAGATAAGCCTGGAGGACTTGTTGTTGACTACATCGGAATTGCACAGGATTTAAAGTATG CGCTTATGAATTACACTTCATCTGGCGGTACTGGAAAACCGACGTATGATATAGAAGATGCAGTAAACCTCATGAAATCA AAATACGAAGCTATGAAAGATTTCTTTTATGGTCATGACTATTCAAAATTCTTTAATGGCACAAATATTGAAAAAATGGA TGTAATTCCAGAAACTTTAGAATTTATCCTCAATCAGCCTGACGGGAAAAAGCGGTTTGTTAAACTTGCGCTTGAACTTA TAAAGTCATACGCTCTATCTCTGCCGCATGAAGAAGCCGTAAAAATCCGTGAGGAAGTCGCGTTCTTTACAGGGGTTAAA GCGGCACTTTATAAAAATACGGAAATTTCAGGAAAACCAGAAGATGAACTAAACAGCGCGATAAAACAGATTGTATCTGG TGCAGTTCGTACTGATGGAATAATCGATGTATTTGGTGAAGCAGGACTTGAAAAACCCGATATTTCGATTCTGTCTGAAC AGTTCCTCGAAGATGTAAAAAACATGAAATATAAAAATTTAGCACTTGAAACGCTTAAAAAAATATTGAATGACGAGATA AGGGCTAAATTTAAAAACAATCTTTTGCAGGAAAAGAAATTTTCAGAGATGATTGAAAACGCGATTAAAAGATACCACAA TAAAGCGATAGATTCGGCGGCAGTTATTCAAGAACTCATAGCAATTGCAAAGGAGATTGAAAACGCTAAAAGAAGAGGGG AAGAATTACATTTAACTGAAGAAGAACTCGCATTTTACGATGCGTTATCAGACAACGATTCAGCACAGGAAATTTTAGGA ACAGAGATTTTAACAGAAATTGCACGAGAACTTACGGAAACATTAAGGAATAGCGTATCTATTGACTGGGAAGTTAGGGA AACTGTAAGGGCAACTTTAAGAGTTAAAATTAAAAGGTTACTTCGAAAATATGGCTATCCTCCAGACAAACAGCAGATTG CAGCTGACCTTGTTTTAAAACAGGCTGAAACAATTTCTAAAGAATGGATTAAGACTTAA Protein sequence : MSNLCEDTIEQGTLELLESIGYEIISGPEIAPDGTSPERKDYSEVVLVSRLRNAISRINPKVPEVAREDALRKVLRLENP NLLMNNEKFHEFIFKGIDVEYPIDGRVKGDKVYLLDKNPLKNEFVAVNQFTIIQNNKNRRPDIVIFVNGLPLSVIELKNP TKEDATIWSAYNQIQTYKSEISELFKYNELILISDGTESRIGTLSSNKEWFLPWKSIDGTSEINNGVSQLKISILGMFDK TRFIDIIKNFIVFKKDGKDIIKVIAGYHQYFAANRAIEKTIEAVSGNRRCGVVWHTQGSGKSLTMAFYAGKLAITPELKN PTIVVVTDRNDLDDQLFGTFASCIDVLKQTPVQAKNAEDLKEQLKVVSGGVIFTTMQKFSVDELNAKYPMLSDRENIIVM ADEAHRSQYGLKARSVEKNGEVGITYGFAKYLRDALPNASFIGFTGTPIDFEDKSTRSIFGEYIDIYDVRRAVADGRTVK IYYESRVAKIGIENDVLAKLDAEFEEVTEFEENYKKEKLKGKWAQLEAIVGSNDRISNVAQDIVNHFEKREETLSGKAIV VCMSRRICVDLYDEIIRLRPEWHNDDDKLGVLKVIMTGSAADGTEWQKHIRTKGKRKELADHFKDSESEFKIAIVRDMWL TGFDVPCLHTLYIDKPMKGHGLMQAIARVNRVFRDKPGGLVVDYIGIAQDLKYALMNYTSSGGTGKPTYDIEDAVNLMKS KYEAMKDFFYGHDYSKFFNGTNIEKMDVIPETLEFILNQPDGKKRFVKLALELIKSYALSLPHEEAVKIREEVAFFTGVK AALYKNTEISGKPEDELNSAIKQIVSGAVRTDGIIDVFGEAGLEKPDISILSEQFLEDVKNMKYKNLALETLKKILNDEI RAKFKNNLLQEKKFSEMIENAIKRYHNKAIDSAAVIQELIAIAKEIENAKRRGEELHLTEEELAFYDALSDNDSAQEILG TEILTEIARELTETLRNSVSIDWEVRETVRATLRVKIKRLLRKYGYPPDKQQIAADLVLKQAETISKEWIKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
