Gene Information

Name : MmarC7_1543 (MmarC7_1543)
Accession : YP_001330752.1
Strain : Methanococcus maripaludis C7
Genome accession: NC_009637
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1507105 - 1507809 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP0523 ABC transporter ATP-binding protein

DNA sequence : 
ATGTACAAAATTATAAGTCTTGAAGATGTTTGGAAAATCTACCAGATGGGTGAAGTTGAAGTTCAAGCCCTAAAAGGAGT
TTCCCTTGACGTAAATAAAGGTGATTTTGTCGCAATTGTTGGATCGTCAGGTTCTGGAAAATCAACCATGATGAATATGA
TAGGATGCCTCGATGTACCAACAAAAGGTGACGTTTACCTTAAAACCAAAAATATCTCACACATGACTGAATCAGAACTA
TCTGAACTTCGTGGAAAGACAATTGGTTTTGTATTTCAGCAATACAATTTAATTCCAAACATGACTGCACTTGAAAACGT
ACTTTTACCTTTGCAAATACAAGAAGTCAATGATTCCACTGCAGATAGGGCTGCAAAGAGAGCATTGAAACAGGTTGGTC
TGGAAGATAGGATGAATAACAAACCATCACAGCTTTCTGGAGGCCAACAACAGCGAGTATCGATTGCAAGAGCGTTAGCA
TGTGACCCCGAAATAATTCTTGCAGATGAACCAACTGGGGCGCTCGACAGTGCGACTGGTAAAGAAATTATAAAATTATT
TATGGCCCTATGGGAAAGTGGAAAAACCATTATTATGATTACGCATGACCCCGATCTTGCAAAATACGCGAAGACCATTG
TTGAATTAAAAGACGGAAATATTATTAGTATAACAGACAACAAACCAAATACAATTCATGAGTGA

Protein sequence : 
MYKIISLEDVWKIYQMGEVEVQALKGVSLDVNKGDFVAIVGSSGSGKSTMMNMIGCLDVPTKGDVYLKTKNISHMTESEL
SELRGKTIGFVFQQYNLIPNMTALENVLLPLQIQEVNDSTADRAAKRALKQVGLEDRMNNKPSQLSGGQQQRVSIARALA
CDPEIILADEPTGALDSATGKEIIKLFMALWESGKTIIMITHDPDLAKYAKTIVELKDGNIISITDNKPNTIHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 7e-34 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC7_1543 YP_001330752.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-53 51
MmarC7_1543 YP_001330752.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-43 45
MmarC7_1543 YP_001330752.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-43 45
MmarC7_1543 YP_001330752.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-42 44