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Name : Smed_0689 (Smed_0689) Accession : YP_001326380.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 742955 - 743980 bp Length : 1026 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMc02640 UDP-glucuronic acid epimerase protein DNA sequence : ATGCGTTACCTCATCACCGGCACTGCGGGTTTCATCGGTTTTCATGTTGCGAAGCGGCTGATCGACGAGGGGCACTTCGT CGTCGGATTTGACGGCATGACGCCCTACTACGATGTGACGCTGAAGGAACGTCGCCACGCGATCCTGCAGCGCTCCAACG GCTTCAAGGCCGTGAGGGCCATGCTGGAGGACCGGGCCGCACTCGACCGGGCAGCCGAGCTCGCCGAACCGGAAGTCATC ATCCACCTCGCCGCCCAGGCGGGCGTCCGCTACAGCCTCGAAAATCCCAAGGCCTATGTCGATTCGAACCTCGTCGGGTC GTGGAATATGCTCGAGCTCGCAAAAGCAATCGCGCCCAAGCACCTGATGCTCGCCTCCACTTCGTCGATCTACGGCGCCA ATGAGAAGATTCCGTTTGCCGAGGCCGATCGGGCCGACGAGCCAATGACGCTTTATGCCGCCACGAAGAAATCAATGGAG CTCATGGCACACAGCTATGCGCATCTCTACGAGGTTCCGACCACCGCCTTCCGTTTTTTCACCGTTTACGGACCCTGGGG ACGACCGGACATGGCGCTCTTCAAGTTCGTCGATGCCATCCACAACGGCCGGCCGATCGACATTTATGGCGAAGGACGGA TGAGCCGGGACTTCACCTATATAGATGACCTCGTCGAGAGCATCGTCCGGCTGTCGCATATTGCGCCCGCGGAGGAGAAC CGGGTGGCACCGGAAAAAGCCACCGACACGCTTTCCCGTCATGCGCCATTCCGCGTCGTCAACACCGGCGGCGGACAGCC GGTGGAGCTCATGACCTTCGTGGAAACGGTCGAGAAGGCGGTGGGGCGTCCGGCGATTCACAACATGCTGCCGATGCAAC AGGGCGATGTACCGCGCACTTTTGCCTCCCCGGACCTGCTTGAAGCCTTGACCGGGTTCAAGCCGTCCGTTTCGGTCGAG GAAGGCGTCGCGCGCTTCGTCGAATGGTATGAACAGAATTATCGTCGTGCACAGACGATTGTCTGA Protein sequence : MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVRAMLEDRAALDRAAELAEPEVI IHLAAQAGVRYSLENPKAYVDSNLVGSWNMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSME LMAHSYAHLYEVPTTAFRFFTVYGPWGRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESIVRLSHIAPAEEN RVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPMQQGDVPRTFASPDLLEALTGFKPSVSVE EGVARFVEWYEQNYRRAQTIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-78 | 51 |
