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Name : Smed_0563 (Smed_0563) Accession : YP_001326254.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 610662 - 612125 bp Length : 1464 bp Strand : - Note : catalyzes the formation of betaine from betaine aldehyde DNA sequence : ATGAGAGCCCAACCGAAAGCCTCGCACTTCATCGACGGCGAATATGTCGAGGACGCCGCCGGCACGGTGATCGAAAGCAT CTATCCGGCGACCGGCGAAGTGATCGCCCGCCTCTATGCTGCAACGCCCGCAATCGTCGAGAAGGCGATCGCCGCGGCCA AGCGGGCGCAGCCGGAATGGGCGGCGATGAGCCCGACGGCTCGCGGCCGCATCCTGAAGCGGGCCGCCGAGATCATGCGC GAGCGCAACCGGGAGCTCTCCGAACTAGAGACGCTCGACACGGGCAAGCCCATCCAGGAAACCATCGTCGCCGACCCGAC CTCGGGCGCCGACAGCTTCGAGTTCTTCGGGGGTATCGCCCCGGCCGCCCTCAATGGCGATTATATCCCGCTCGGCGGCG ATTTCGCCTATACGAAGCGGGTACCTCTCGGCGTCTGTGTCGGCATCGGCGCCTGGAACTATCCGCAGCAGATCGCCTGT TGGAAGGGTGCGCCTGCCCTCGTCGCCGGCAATTCGATGGTGTTCAAGCCGTCGGAGAACACGCCTCTCGGCGCGCTGAA GATCGCCGAAATCCTGATCGAAGCGGGTCTGCCGAAGGGCCTGTACAACGTCGTTCAGGGCGACCGATCGACTGGACCCC TCCTCGTCAATCATCCTGACGTCGCCAAGGTATCGCTGACCGGCTCGGTGCCGACCGGCCGCAAGGTCTATGAGGCGGCC GCGGCCGGACTTCGCCACGTCACGATGGAGCTCGGGGGCAAGTCGCCGCTGATCGTCTTCGACGATGCCGATCTCGAAAG CGCGATCGGCGGCGCCATGCTCGGCAATTTCTATTCGACCGGTCAGGTCTGCTCCAACGGCACGCGCGTCTTCGTTCAGA AGAAGATAAAGCAATCCTTCCTGGCGCGGCTGAAGGAGCGTACCGATGCGATCGTCATCGGGGACCCGATGGACGAGGCG ACGCAGCTCGGGCCGATGGTATCCACGGCGCAGCGTGACAAGGTCTTCTCTTATATCGAGAAAGGCAAATCGGAGGGCGC GCGGCTCGTGACCGGCGGCGGCATCCCCAACAATGTGAGCGCCGAAGGCACCTATATCCAGCCGACGGTCTTTGCCGATG TCACCGACGAGATGACCATCGCGCGCGAAGAAATCTTCGGCCCGGTCATGTGCGTGCTTGATTTCGATGACGAGGCGGAG GTCGTCGCACGCGCCAACGCCACCGAATTCGGCCTCTCCGCCGGCGTCTTCACCGCCGACCTCACCCGCGCCCATCGCGT CGTCGACCGGCTGGAGGCCGGAACGCTCTGGATCAACACCTATAATCTCTGCCCGGTCGAGATTCCGTTCGGCGGATCCA AGCAGTCCGGCTTCGGGCGCGAGAATTCAGCCGAAGCGCTCAAACACTATACCGAGCTCAAGACCGTCTATGTCGGCATG GGACCGGTCGAGGCGCCGTATTGA Protein sequence : MRAQPKASHFIDGEYVEDAAGTVIESIYPATGEVIARLYAATPAIVEKAIAAAKRAQPEWAAMSPTARGRILKRAAEIMR ERNRELSELETLDTGKPIQETIVADPTSGADSFEFFGGIAPAALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIAC WKGAPALVAGNSMVFKPSENTPLGALKIAEILIEAGLPKGLYNVVQGDRSTGPLLVNHPDVAKVSLTGSVPTGRKVYEAA AAGLRHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVQKKIKQSFLARLKERTDAIVIGDPMDEA TQLGPMVSTAQRDKVFSYIEKGKSEGARLVTGGGIPNNVSAEGTYIQPTVFADVTDEMTIAREEIFGPVMCVLDFDDEAE VVARANATEFGLSAGVFTADLTRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAEALKHYTELKTVYVGM GPVEAPY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-79 | 41 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 7e-76 | 41 |
