Gene Information

Name : Smed_3501 (Smed_3501)
Accession : YP_001329154.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG2510
EC number : -
Position : 3707421 - 3708296 bp
Length : 876 bp
Strand : +
Note : PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00381 hypothetical protein

DNA sequence : 
ATGAGCGGGCGCCGCACCGATATTATGCTCACGGCCGTAGCTCCGGCGATTTGGGGCAGCACCTATCTCGTAACGACGGA
ATTCCTGCCCGCGGGCTATCCGCTGCACGTCGCGATGCTGAGGGCGCTTCCGGCGGGCCTGCTGCTGTTGATCATCGTCC
GGCGCATGCCGAAGGGAGTCTGGTGGCTGCGCGCCTTTCTGCTCGGCGCCCTCAACTTCTCTTTCTTCTGGGCGATGCTT
TTCGTGTCCGCCTACCGCCTGCCGGGCGGCGTAGCGGCGACCGTCGGTGCCGTTCAGCCGTTGATCGTTGTGGTCCTGTC
GCGGGTCATCCTCGGCTCACCGATAAGGCGTCTGAGCGTCATCGCAGGCGCCGCGGGTCTGGCCGGCGTTGCGCTTCTGG
TGCTGACGCCGAAAGCCGCGCTCGACCCGATCGGCGTTGCGGCCGGCCTCGCAGGCACCGTATCGATGGCTTTCGGAACG
GTGCTGAGCCGTCACTGGACGCCGCCGGTCTCGCCGCTCACCTTCACCGCCTGGCAATTGGCGGCGGGAGGCCTGCTTCT
GGTGCCCGTGGCCCTCTTCTTCGAGCCCGCCTTGCCGCCGCTCACCGCCGAAAACCTTCTCGGCTTCGCCTATCTCGGCC
TGATCGGCGCAGCCTTCACCTATCTGCTCTGGTTCCGCGGACTGTCGCGGCTCGAGCCCTCTCAGGTCTCGCCGCTCGGC
TTCTTAAGCCCGGTCGTGGCGATCCTGCTCGGCTGGGGCATACTTGATCAACAACTCGTCACCGTGCAGGTGGTTGGCAT
CGCAATCGTCTTCGCAAGCGTGTGGATGAGCCAGCAGGCGCAGATGGGGCATCGGGCGTTGCCGATGCGTGCGTAG

Protein sequence : 
MSGRRTDIMLTAVAPAIWGSTYLVTTEFLPAGYPLHVAMLRALPAGLLLLIIVRRMPKGVWWLRAFLLGALNFSFFWAML
FVSAYRLPGGVAATVGAVQPLIVVVLSRVILGSPIRRLSVIAGAAGLAGVALLVLTPKAALDPIGVAAGLAGTVSMAFGT
VLSRHWTPPVSPLTFTAWQLAAGGLLLVPVALFFEPALPPLTAENLLGFAYLGLIGAAFTYLLWFRGLSRLEPSQVSPLG
FLSPVVAILLGWGILDQQLVTVQVVGIAIVFASVWMSQQAQMGHRALPMRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM AGK07028.1 PecM Not tested SGI1 Protein 4e-66 67
pecM AGK07086.1 PecM Not tested SGI1 Protein 4e-66 67
pecM ACN81012.1 PecM Not tested AbaR5 Protein 5e-66 67
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 4e-66 67