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Name : deoA (Smed_3342) Accession : YP_001328998.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 3542078 - 3543394 bp Length : 1317 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGGCGATGCTCCCGCAGGAAGTCATACGTAAGAAAAGGGATGGCGGCAGGCTCGTTCCGGCGGAGATCGCCGGTTTCAT CGAGGGTCTGGCCGATGGCTCGATCTCGGAAGGTCAGGCCGCCGCTTTCGCCATGGCGGTCTGGTTCTCCGGCATGAGCC GGGACGAATGTGTGGCGCTGACGCTGGCGATGCGCGATTCCGGGGAGACGCTCGACTGGGGCGAGTTCGGGCGCCCGGTT GTCGACAAGCACTCGACCGGCGGCGTCGGCGATAATGTCTCTCTGATGCTGGCGCCGATTGTCGCCGCCTGCGGACCTGT GGTCCCGATGATCTCAGGTCGTGGGCTCGGCCATACCGGCGGCACGCTCGACAAGCTCGAGTCTATCCCGGGCTACAATA TCCAGCCCTCGCCAGAGCTGTTTCGCCGCGTGGTCGACGAGGTCGGCTGCGCCATCATCGGCCAGACGGCCAATCTCGCC CCCGCCGACAAGCGCCTCTATGCAATCCGCGACGTGACGGCGACGGTCGACTCCGTGCCACTGATCACCGCATCGATCCT GTCGAAAAAGCTCGCCGCGGGGCTTCAGTCACTGGTACTCGACGTCAAGCTCGGCAATGGCTCCTTCATGACGGATCCAG CCGAGACCGAAATTCTGGCCCGTTCGCTTGTCGAGGTCGCCAATGGCGCGGGCGTGCGCACCTCGGCGCTGATCACCGAC ATGAACGAGCCATTGGCGGACGCGGCCGGCAACGCGCTCGAAGTCGAGAACTGCCTTGCTTATCTCAGCGGCAAGAAGGC GGGAACCCGCCTCGATCGGGTGGTCATGGCCTTTGCGGCGGAAATGCTCGCCGCAGCGGGCGTGTCGGCGCACAAGGCTG AAGGCGAGGCCATGGCCCGCCGTGCCCTGGAGAGCGGCGAGGCTTTGGAACGCTTCGGCCTCATGGTGCATCGGCTCGGC GGCCCCGCCGATTTCGTGGAACGGCCCGAGGCCTATCTCGAACGGGCGCCGGCGATCGTGCCGGTCGCGGCGGCCCGCGA CGGCTATCTGGCCGCCTGCGAGACGCGCGAACTCGGAATGGCGGTCATCGCGCTCGGCGGCGGGCGCCGGCGGCCGGACG ACCGAATCGATCATCGCGTCGGCCTTGCCGGATTGAGACCGCTCCGGACGAAGGTGGAAAAGGGTGAGCCGATCGCTTTT GTCCATGGCGCCGACCGCGACCAGGCCGAGGCGGTCGCAAAGCGGGTGGCAACGCTCTACGCGATCGCGGAGGAGGCGCC CGCGCAACGCCCGGTGATCGCGTCAAGGCTCGTTTGA Protein sequence : MAMLPQEVIRKKRDGGRLVPAEIAGFIEGLADGSISEGQAAAFAMAVWFSGMSRDECVALTLAMRDSGETLDWGEFGRPV VDKHSTGGVGDNVSLMLAPIVAACGPVVPMISGRGLGHTGGTLDKLESIPGYNIQPSPELFRRVVDEVGCAIIGQTANLA PADKRLYAIRDVTATVDSVPLITASILSKKLAAGLQSLVLDVKLGNGSFMTDPAETEILARSLVEVANGAGVRTSALITD MNEPLADAAGNALEVENCLAYLSGKKAGTRLDRVVMAFAAEMLAAAGVSAHKAEGEAMARRALESGEALERFGLMVHRLG GPADFVERPEAYLERAPAIVPVAAARDGYLAACETRELGMAVIALGGGRRRPDDRIDHRVGLAGLRPLRTKVEKGEPIAF VHGADRDQAEAVAKRVATLYAIAEEAPAQRPVIASRLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-61 | 42 |
