Gene Information

Name : Smed_3264 (Smed_3264)
Accession : YP_001328923.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 3443126 - 3443683 bp
Length : 558 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGAGCGAACACAACCCTTACGGAACGATGCATGCGACCACCATCATCACGGTGCGCAAGGGCGGCAAGGTGGTGATGGC
CGGCGATGGCCAGGTGAGCCTTGGTCAGACGGTTATGAAAGGCAACGCCCGCAAGGTTCGCCGGCTGTCGAAGGGCGATG
TGATTGCAGGCTTCGCAGGCGCGACGGCGGACGCCTTCACCCTCCTCGAAAGGCTCGAGGTAAAGCTCGAGCAGTATCCC
GACCAGTTGATGCGAGCGGCCGTGGAACTCGCCAAGGACTGGCGCACCAACAAGTATCTGCGCAACCTCGAGGCCATGAT
GCTGGTCGCCGACAGATCGGTGACGCTGGCGATCACCGGAAACGGTGACGTTCTCGAGCCCGAGCACGGCACGATCGCTA
TCGGTTCGGGCGGTAACTACGCTTTTGCGGCAGCGCGGGCGCTCATGGATACCGACAGGTCGGCCGAGGAGATCGCCCGC
CGGGCGCTCGAGATCGCCGGCGACATATGCGTTTACACGAACCACAATGTCGTCTTGGAGACGCTGGATGCCGAATGA

Protein sequence :
MSEHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLLERLEVKLEQYP
DQLMRAAVELAKDWRTNKYLRNLEAMMLVADRSVTLAITGNGDVLEPEHGTIAIGSGGNYAFAAARALMDTDRSAEEIAR
RALEIAGDICVYTNHNVVLETLDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 4e-22 48