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Name : Smed_3222 (Smed_3222) Accession : YP_001328881.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 3396441 - 3397895 bp Length : 1455 bp Strand : + Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMc02780 probable succinate-semialdehyde dehydrogenase [NADP+] protein DNA sequence : ATGAATTTGAAAGACCCGTCGCTGTTTCGCCAGGCCGCTCTTGTGGGCGAAACCTGGATCGAAGCCGATCCGAAAAACGC GATCGAGGTGAACAACCCTGCGACCGGTGAAATCATCGGCCATGTTCCGAAGCTCGGCGCCGCCGAGACGAAGGCCGCGA TCGAGACTGCGGCACGGGTACAGAAGGAATGGGCCGCGAGGACCGCCAAGGAGCGTTCGGCGGTGCTGCGCCGTTGGTTC GAGCTGATGATCGAGAACAAGGACGATCTCGGCCGAATATTGACGAGCGAGCAGGGCAAGCCGCTTGCGGAGGCGACCGG AGAGATCGTTTACGGCGCCAGCTTCATCGAGTGGTTTGCGGAAGAAGCGCGTCGCATCTATGGCGATCTCGTTCCAGGCC ATCAGAAAGACAAGCGCATTCTGGTGATGAAGCAGCCGATCGGCGTCGTTGCGGCGATCACGCCCTGGAACTTCCCGAAC GCAATGATCACCCGCAAGGCCGGCCCCGCCTTTGCCGCCGGCTGCGCCATGGTCCTGAAACCGGCTGCACAGACGCCGTT CTCGGCCATTGCCATTGCCGTGCTCGCCGAGCGCGCGGGCATGCCGAAAGGGCTCTTCAGTGTCATCACCGGCTCGGCGC GGGAGATCGGCGCCGAGATGACGTCGAACCCGACCGTCCGCAAACTGACCTTTACCGGCTCTACCGAAGTCGGCGCGGAG CTGTATCGCCAGAGCGCCGCCACGATCAAGAAGCTTGGACTGGAACTCGGCGGCAACGCCCCCTTCATCGTCTTCGATGA CGCCGATCTCGATGCGGCGGTAGAAGGCGCTCTCATCGCCAAGTTCCGCAACAACGGGCAGACCTGCGTCTGCGCAAATC GCATCTATGTGCAGGAGGGCGTCTACGACGCCTTTTCCAGGAAGCTTGCCGCGGCCGTCGGCAAACTCACGACCGGCAAC GGTATGGAAGACGGCGTCATCCTCGGTCCGCTGATCGACCAGCCGGCACTTGCCAAGGTCGAGGAGCATGTGGCCGACGC GCTGGCGAAAGGCGCGCGCGTGATCGAGGGCGGCCGGCGCCATGCGCTCGGCGGTACCTTCTACGAGGCGACGGTCCTTG CGGACGTCACCCAGGAGATGGCGGTCGCACGCGAGGAAACCTTCGGTCCGGTGGCGCCGCTCTTTCGTTTCAGGGACGAG TCGGACGTCATCCAACAGGCCAACGACACGGAATTCGGTCTTGCCTCCTATTTCTACGCCAAGGATCTCGCCCGCGTCTT CCGGGTCGCGGAAGCGCTGGAATACGGCATGGTCGGCGTCAATACCGGTCTTATCTCGACTGCGGAAGCACCCTTTGGCG GCGTCAAACTCTCGGGGCTTGGCCGCGAGGGCTCGCGTTACGGCCTCGAGGAGTTCACCGAGATCAAATATGTCTGCCTC GGCGGTATCGCCTGA Protein sequence : MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGHVPKLGAAETKAAIETAARVQKEWAARTAKERSAVLRRWF ELMIENKDDLGRILTSEQGKPLAEATGEIVYGASFIEWFAEEARRIYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN AMITRKAGPAFAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEGVYDAFSRKLAAAVGKLTTGN GMEDGVILGPLIDQPALAKVEEHVADALAKGARVIEGGRRHALGGTFYEATVLADVTQEMAVAREETFGPVAPLFRFRDE SDVIQQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSRYGLEEFTEIKYVCL GGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-150 | 62 |
