Gene Information

Name : Smed_3138 (Smed_3138)
Accession : YP_001328799.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 3287781 - 3288542 bp
Length : 762 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03894 putative amino-acid ABC transporter ATP-binding protein

DNA sequence :
ATGATCGAGCTCTCCCACATCGTCAAGCGCTTCGGCACCAACACCGTGCTGAATGACATCAGCGTCTCGCTCGCGGAGGG
CAGCGTGACCGCACTCGTCGGACCTTCCGGCGGCGGCAAGAGCACGCTGTTGCGCTGCGTCAACCTGTTGGAAATCCCGA
CCGCCGGGGCGATCCGGCTCGGAGACGACCGGCTTGAATTCGCCGAGGGCCGCAAGGTCGGCTGGCAGGCGATCCAGAGG
CTGCGCCGCCAGACCGGAATGGTGTTCCAGAATTTCCAGCTCTTTCCGCACCAGACGGCGATCGGCAATGTGATGGAGGG
CCTGGTGACCGTGCTCAAATGGCCCCCCGACCGGGCCCGGACACGGGCGCTCGAACTTCTGGAGAAGGTCGGCATGGCAC
ACAAGGCGGATGCCTGGCCGGCGACCCTTTCCGGCGGCCAGCAACAGCGCGTGGCGATCGCCCGGGCGCTCGCGCCATCG
CCGCGCGTGCTTCTCTGCGACGAACCGACCTCGGCGCTGGACCCCGAACTGGCGGAGGAAGTGGTGGAGGTCCTGAGCCG
CCTCGCCCGCGATGGTACGACGATGATCATGGCAACCCACGACCTTCGCCTCGCCTCCCGCGTCGCCGATCACGTGGTTT
TCCTGGATGGCGGCGTCGTCGTCGAAAGCGGTCCGCCGCGCAAGATCTTTTCCACGCCGGAGCGGGAGCGCACGAAGCGA
TTCATCGCCTCGCTCAGCGCGCCGATGAGCTACGATATCTGA

Protein sequence :
MIELSHIVKRFGTNTVLNDISVSLAEGSVTALVGPSGGGKSTLLRCVNLLEIPTAGAIRLGDDRLEFAEGRKVGWQAIQR
LRRQTGMVFQNFQLFPHQTAIGNVMEGLVTVLKWPPDRARTRALELLEKVGMAHKADAWPATLSGGQQQRVAIARALAPS
PRVLLCDEPTSALDPELAEEVVEVLSRLARDGTTMIMATHDLRLASRVADHVVFLDGGVVVESGPPRKIFSTPERERTKR
FIASLSAPMSYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 3e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smed_3138 YP_001328799.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-21 42