Gene Information

Name : Smed_3051 (Smed_3051)
Accession : YP_001328712.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 3199165 - 3200520 bp
Length : 1356 bp
Strand : +
Note : TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sme:SMc03807 probable ammonium transporter protein

DNA sequence :
ATGTCGTCATTCATTCCTTCCACCTCTCTTCGGCGCGTGGCCGCGACGGCTTCCGCCATGCTCGCGCCCGTCGTTGCATT
TGCTCAGGAAGCGGCACCCGCCGCGGCCGCAACACCGGTGCCGGACAAGGCCGATACCGCGTTCATGTTCCTTTCGACGC
TGCTCGTCCTGTTCATGCTGATTCCGGGCCTTGCCCTCTTTTACGGCGGCCTCGTACGAGCCAAGAACATGCTGTCGGTG
CTGATGCAGTGCACGGTCATCGGCGCCGCCATGATGATCGTCTGGGTCGTTTACGGTTATTCATTTGCATTCGGCGGCTC
GACCAGCGCCTATTTCGGCGGCTTCGCCAAGCTTTTCCTCGCGGGCGTGACCGTCGATAGCACGGCTGCGACCTTCACCG
ACGGTGTCGTCATCCCGGAATATCTCTTCATGCTGTTCCAGATGACCTTCGCCGCGATCACCCCGGCACTCATCGTCGGT
GCCTTTGCCGAGCGTATCAAGTTCTCGGCCGCAATCCTCTTCTCCATTCTCTGGGCGACATTCGTCTATTTTCCAATCGC
GCATATGGTCTGGGACGCCAACGGGCTGCTCTTCGGCATGGGCGCGCTTGATTTTGCCGGCGGCACCGTCGTCCATATCA
ATGCCGGCGTCGCAGGCCTCGTGGGTGCATTCATGGTGGGCAAGCGCATCGGCTATGGCAGGGATATGATGGCCCCGCAT
TCGATGACCCTGACGCTTGTCGGAGCGGCCATGCTGTGGTTCGGCTGGTTCGGCTTCAATGCCGGCTCCAACCTCGAAGC
ATCCGGCGGTGCGGTTCTGGCTACCGTCAACACCTTCCTCGCAACGGCTGCCGCAGTTCTTTCGTGGTCGCTCGTCGAAA
CGCTGACGCGTGGCAAGGCGTCGATGCTCGGCGCCGCCTCGGGCATGATTGCCGGCCTCGTCGCCGTCACCCCGGCTGCC
GGTATCGCCGGCCCGATGGGTGCCATCATTATGGGCCTGATCGTCTCGCCGCTCTGCTACTTCTTCGTCTCGGTCATCAA
GAACAAGTTCCACTATGACGACACAGCAGACGTCTTCGGCGTTCATGGCGTCGGCGGTTTCTTCGGCGCGATCGCTACCG
GCATCTTCGCCTCCTCGTCGCTCGGCGGCATCGGCTATGCCGACGGCGTGACCATGGCCGGCCAGCTCATGACCCAGCTC
ACGGCAGTCGCCATCACGATCGTCTGGTGCGGCGTCGTTTCCGTCATCCTTTACAAGGTGGTCGATGCGCTTGTCGGCCT
GCGCGTCAGCGTGGAAGCGGAGCGGGAAGGCCTCGACCTCTCCTCGCATGGCGAAGCCGCTTATCACGCGAGCTGA

Protein sequence :
MSSFIPSTSLRRVAATASAMLAPVVAFAQEAAPAAAATPVPDKADTAFMFLSTLLVLFMLIPGLALFYGGLVRAKNMLSV
LMQCTVIGAAMMIVWVVYGYSFAFGGSTSAYFGGFAKLFLAGVTVDSTAATFTDGVVIPEYLFMLFQMTFAAITPALIVG
AFAERIKFSAAILFSILWATFVYFPIAHMVWDANGLLFGMGALDFAGGTVVHINAGVAGLVGAFMVGKRIGYGRDMMAPH
SMTLTLVGAAMLWFGWFGFNAGSNLEASGGAVLATVNTFLATAAAVLSWSLVETLTRGKASMLGAASGMIAGLVAVTPAA
GIAGPMGAIIMGLIVSPLCYFFVSVIKNKFHYDDTADVFGVHGVGGFFGAIATGIFASSSLGGIGYADGVTMAGQLMTQL
TAVAITIVWCGVVSVILYKVVDALVGLRVSVEAEREGLDLSSHGEAAYHAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 4e-69 50
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 4e-69 50