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Name : Smed_2829 (Smed_2829) Accession : YP_001328494.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 2954038 - 2955432 bp Length : 1395 bp Strand : + Note : E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGAAGGAAATCTCCTGCAAACTCCTGGTTCTTGGCGCCGGTCCCGGCGGCTATGTCACGGCGATCCGCGCCGCCCAGCT CGGCGTCAACACCGTGATCGTCGAGAAGGCGAAGGCCGGCGGCACCTGCCTGAATGTCGGCTGTATTCCATCCAAGGCGC TGATCCATGCGGCGGAAGAATACGACAAGCTCCGCACGGCCGCATCGGGTAAGAGCCCGCTCGGCCTCTCCTTGAATGCT CCCGCAATCGACCTCGGCCGAACGATAGCCTGGAAGGACGGTATCGTCGGGCGGCTCAACAGCGGCGTCACAGGGCTCCT GAAAAAGGCGGGCGTCAAGGCGGTTATCGGCGAGGGGCGTTTCGTCGACGGCAAGACCGTGGATGTGGAAACGGAGACGG GCCTCCAGCGCATTCGAGCGGAAGCGCTCGTCATCGCGACCGGTTCGGCGCCGATCGAGCTCCCCGACCTGCCCTTCGGC GGAAATGTGATTTCCTCGACCCAGGCTTTGGCGCTGACGAAAATACCCGAAACGCTCGCGGTCGTCGGTGGCGGCTATAT CGGCCTCGAACTCGGCACCGCCTTTGCCAAGCTCGGTTCCAAGGTCACCGTGCTCGAAGCGTTGGACAGAATCCTGCCGC AATACGACGCCGATCTCTCGAAGCCGGTGATGAAGCGCCTCGGCGAACTCGGTGTGGAGGTCTTCACGGGCACCGCGGCA AAGCGGCTCTCCGCCGATCGGCGCGGGCTCTTTGCCGAGGAAAACGGCCGCGCCTTCGAGGTCCCGGCGGAGAAGGTCCT CGTCACCGTCGGTCGCGGGCCTGTCACCGAGGGCTGGGGACTTGAAGAGATCGATCTCGACCGGTCGGGCGGATTCATCC GCATCGACGATCAGTGCCGCACTTCGATGCGCGGTATCTATGCGATCGGCGACGTGACCGGCGAGCCGATGCTTGCGCAC CGCGCAATGGCACAGGGCGAAATGGTCGCGGAGATCGTCGCCGGTCGAAAGCGGAGCTGGGACAAGCGCTGCATCCCGGC GGTTTGCTTCACCGATCCGGAAATCGTCGGCGCCGGCCTCTCGCCGGAAGAGGCTCGCACGGCCGGCATCGATACCAGGA TCGGCCAGTTTCCTTTCCAGGCGAACGGCCGTGCGATGACAACGCTTTCCGAGGACGGCTTCGTCCGCGTGGTCGCCCGG GCCGACAATCACCTGGTCCTCGGCATCCAGGCGGTCGGCCACGGCGTTTCGGAACTGTCGGCGACCTTTGCGCTGGCGAT CGAAATGGGCGCGCGGCTGGAGGATATCGCCGGCACCGTCCATGCGCATCCGACGCAGTCCGAGGCGTTTCAGGAGGCCG CCTTCAAGGCGCTGGGGCACGCGCTGCATATCTGA Protein sequence : MKEISCKLLVLGAGPGGYVTAIRAAQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEEYDKLRTAASGKSPLGLSLNA PAIDLGRTIAWKDGIVGRLNSGVTGLLKKAGVKAVIGEGRFVDGKTVDVETETGLQRIRAEALVIATGSAPIELPDLPFG GNVISSTQALALTKIPETLAVVGGGYIGLELGTAFAKLGSKVTVLEALDRILPQYDADLSKPVMKRLGELGVEVFTGTAA KRLSADRRGLFAEENGRAFEVPAEKVLVTVGRGPVTEGWGLEEIDLDRSGGFIRIDDQCRTSMRGIYAIGDVTGEPMLAH RAMAQGEMVAEIVAGRKRSWDKRCIPAVCFTDPEIVGAGLSPEEARTAGIDTRIGQFPFQANGRAMTTLSEDGFVRVVAR ADNHLVLGIQAVGHGVSELSATFALAIEMGARLEDIAGTVHAHPTQSEAFQEAAFKALGHALHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 6e-83 | 44 |
