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Name : Smed_2650 (Smed_2650) Accession : YP_001328315.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 2753171 - 2755126 bp Length : 1956 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGGCGAATGCAATCCGTTTCCTCTCCATGGACGCCGTCGAGAAGGCAAATTCCGGCCACCCTGGCCTCCCAATGGGCGC CGCCGATATCGCCACGGTGCTGTTTACCCGCTATCTGAGCTTCGATCCGAAAAACCCCGCCTGGCCGAACCGTGACCGTT TCGTGCTTTCGGCCGGCCACGGATCCATGCTGCTCTATTCGCTGCTCTATCTCACGGGCTACGACGACATCACCATCGAC GAGATCAAGAATTTCCGCCAGCTGGGTTCGCGCACGGCAGGCCACCCGGAATACGGACACGCCGCGGGCATCGAGACGAC GACCGGTCCGCTCGGCCAGGGCATTGCCAACTCCGTCGGCATGGCGATCGCCGAGCGCAAGCTGCGCGAGGAGTTCGGCA GCGAGCTGATGGAGCATTATACCTATGTGCTTGCCGGCGACGGCTGCCTGATGGAAGGCGTGAGCCAGGAAGCCATCGCG CTTGCCGGTCATCTGAAGCTAAACAAGCTGATCGTCTTTTGGGACGACAACAATATTTCCATCGACGGCCCGATCTCGCT TGCCGATTCGACCGACCAGCACGCGCGCTTCCGCGCCTGCAAGTGGCACACCATCGCCGTGAACGGCCATGACCCCGAAG CGATCGCCGCCGCGATCGAGGAGGCCCAGAAGTCCGACAAGCCGACCATGATCGCCTGCAAAACCGTGATCGGCTTCGGC GCGCCGAACAAGGCCGGTACCCACAAGGTCCACGGCTCACCGCTCGGCGCCGAGGAAATCGCAGCCACCCGCAAGGCGCT CGGCTGGGAGGCCGAAGCTTTCACGGTCCCCTCGGACGTGCTTGATGCCTGGCGTATCGCGGGCCTGCGTTCGGCCAAGG CACGCAAGGAATGGGAAGAGCGGCTCGAAGCCGCCGAGGCGGAGAAGAAAGCCCATTTCATCCGCCGCTTCTCCGGCGAA CTCGAAGGCAGCCTCGCCTCGGCGATCAGCGCCTACAAGCAGAAGCTTGCCGAGACCAAGCCTTCGCCGGCGACCCGCAA GGCCTCGGAGGATGCGCTGGAGGTGATCAACGGCGTGCTTGCAGAGACGATCGGCGGCTCGGCCGACCTGACCGGCTCCA ACAACACCAAGACGAGCCAGACCCACTCCATCACCCCGGACGATTTCTCCGGACGCTACATTCACTACGGCGTGCGCGAG CATGGCATGGCGGCCGCGATGAACGGTATGGCGCTGCATGGTGGTCTCATTCCCTATTCCGGCGGCTTCCTGATCTTCTC GGATTACTGCCGCCCATCCATCCGCCTGGCCGCCCTCATGGGTATCCGCGTCATCCACGTGCTGACACACGATTCCATCG GCCTCGGCGAAGACGGACCGACCCACCAGCCGGTCGAGCATATGGCTGCTCTTCGGGCCATCCCTAACCTCCTGATGTTC CGCCCCGCGGATGCGACCGAGACCGCCGAATGCTGGCAGCTTGCGCTGGAGAACCGCAAACGTCCCTCGGGTCTTGCGCT TACCCGCCAGAACCTCATGGCGGTGCGCACCGAATACGAGGAACAGAACCTCTGCGCCCGCGGCGCCTATGACCTGATTT CGGCAAGCGACGCGCAGGTCACGATCTTCGCCACCGGCTCCGAAGTCGAGATCGCCGTGAAGGCCTGCCAGACGCTGACT GCCAAGGGTATCGCGACACGCGTCGTCTCGGTTCCCTGCTTCGAGCTCTTTGCGGAGCAGAGCGAGGATTACCAGCAGGC GATCATCGGCACGTCGCCGGTCAAGATCGCCGTCGAAGCCGGCATCCGCCAGGGCTGGGACCACTTCATCGGCAATGATG GTATCTTCATCGGCATGTCGAGCTTCGGGGCTTCGGGCCCCTATAAGGACCTCTACAAACACTTCGGAATTACGCCGGAA GTCGTGGTTGCGTCCGCCGAAGCCAAGCTGTCCTGA Protein sequence : MANAIRFLSMDAVEKANSGHPGLPMGAADIATVLFTRYLSFDPKNPAWPNRDRFVLSAGHGSMLLYSLLYLTGYDDITID EIKNFRQLGSRTAGHPEYGHAAGIETTTGPLGQGIANSVGMAIAERKLREEFGSELMEHYTYVLAGDGCLMEGVSQEAIA LAGHLKLNKLIVFWDDNNISIDGPISLADSTDQHARFRACKWHTIAVNGHDPEAIAAAIEEAQKSDKPTMIACKTVIGFG APNKAGTHKVHGSPLGAEEIAATRKALGWEAEAFTVPSDVLDAWRIAGLRSAKARKEWEERLEAAEAEKKAHFIRRFSGE LEGSLASAISAYKQKLAETKPSPATRKASEDALEVINGVLAETIGGSADLTGSNNTKTSQTHSITPDDFSGRYIHYGVRE HGMAAAMNGMALHGGLIPYSGGFLIFSDYCRPSIRLAALMGIRVIHVLTHDSIGLGEDGPTHQPVEHMAALRAIPNLLMF RPADATETAECWQLALENRKRPSGLALTRQNLMAVRTEYEEQNLCARGAYDLISASDAQVTIFATGSEVEIAVKACQTLT AKGIATRVVSVPCFELFAEQSEDYQQAIIGTSPVKIAVEAGIRQGWDHFIGNDGIFIGMSSFGASGPYKDLYKHFGITPE VVVASAEAKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-150 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-144 | 49 |
