Gene Information

Name : fliP (Smed_0264)
Accession : YP_001325958.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 283491 - 284228 bp
Length : 738 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGCTCCGGTTCGCCACGTTCATAATCGCCATGATGGCGATGTCGGGAATTGCCGGGGCTCAAGGGTTTCCGGCCGATAT
CCTGAATACGCCGGTCGATGGCTCCGTCGCCTCATGGATCATCCGCACCTTCGGCCTGCTGACCGTTCTTTCGGTCGCTC
CCGGCATCCTGATCATGGTGACGAGCTTCCCACGCTTCGTGATCGCCTTCGCGATCCTGCGCTCAGGCATGGGGCTTGCG
ACGACCCCCTCCAACATGATCATGGTGTCGCTCGCTTTGTTCATGACCTTCTACGTCATGGCGCCCACCTTCGACCGCGC
CTGGCGCGACGGCATCGATCCGCTTCTGAAAAACGAGATCTCCGAAACGGAGGCAATGCAGCGGATGTCCGAACCTTTCC
GCGAATTCATGCTGGCCAACACCCGCGACAAGGACCTGCAGCTGTTCATCGACATTGCCCAGGAAAAGGGCCAGACCGTC
GTCGTGGACGAGAAGGTGGACCTGCGCGCCGTCGTTCCGGCCTTCATGATCTCGGAAATCCGTCGCGGCTTCGAGATCGG
CTTCCTGATCATGCTGCCCTTCCTTGTGATCGACCTGATCGTCGCGACGATCACCATGGCTATGGGCATGATGATGCTTC
CCCCGACGGCGATTTCGCTGCCCTTCAAAATCCTGTTTTTCGTGCTGATCGACGGCTGGAACCTGCTCGTCGGCAGCCTC
GTGCGGTCCTTCATCTGA

Protein sequence : 
MLRFATFIIAMMAMSGIAGAQGFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFAILRSGMGLA
TTPSNMIMVSLALFMTFYVMAPTFDRAWRDGIDPLLKNEISETEAMQRMSEPFREFMLANTRDKDLQLFIDIAQEKGQTV
VVDEKVDLRAVVPAFMISEIRRGFEIGFLIMLPFLVIDLIVATITMAMGMMMLPPTAISLPFKILFFVLIDGWNLLVGSL
VRSFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001325958.1 flagellar biosynthesis protein FliP VFG1259 Protein 3e-48 49
fliP YP_001325958.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-48 47
fliP YP_001325958.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-47 45
fliP YP_001325958.1 flagellar biosynthesis protein FliP VFG2016 Protein 5e-46 43
fliP YP_001325958.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-30 41