Gene Information

Name : Smed_2585 (Smed_2585)
Accession : YP_001328250.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 2686127 - 2686954 bp
Length : 828 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00670 histidine transport ATP-binding ABC transporter protein

DNA sequence :
ATGGCTGATATTGAGATCCGGAACGTCTACAAGATTTTCGGGCACGACGCGAAGAAGGCCCTGGGCATGGTCAGGGATGG
CCTCGGCAAGGCAGATATCCTGGCGAAATCCGGCTGCAGCGTGGGCCTCAACGATGTGAGCCTGAAAATCGGCGCCGGGA
AGATCTTCGTGATCATGGGGCTCTCCGGGTCCGGGAAATCAACCCTGGTGCGTCACATCAACCGGCTGATCGACCCCACG
AGCGGCGAGGTCCTTTTCGACGGCAGCAACATTCTCGATCTTGACGCGAAGGCGTTGCGTGCGTTCCGAATGCGGCGCGT
CAGCATGGTCTTTCAGAGCTTTGCTCTGATGCCGCACAGGACCGTTCTGCAGAATGTCGTCTACGGCCAGCGCGTGCGCG
GAGTGGCGAAAGCCGATGCCCGTGAGATCGGCATGAAATGGATCGAAACGGTGGGCCTCTCCGGCTATGACGCCAAGTTT
CCCCATCAGCTCTCGGGCGGCATGAAACAGCGCGTCGGCCTGGCACGGGCGCTTGCTGCCGACACCGACGTCATCCTGAT
GGATGAGGCGTTCAGTGCCCTTGATCCGCTGATCCGCGGCGACATGCAGGACCAATTGCTGCAACTGCAGCAAAATCTCT
CAAAGACCATCGTGTTCATCACGCACGACCTCGACGAGGCTCTGCGCATCGGATCGGAGATCGCGATCCTGAAGGACGGC
CAGGTCGTTCAGGTCGGTAATCCGAGCGAGATTCTCGACAATCCCGCCAACGACTATGTCGCCCGGTTCGTCCAGCGCCG
TCATGAAAGGCCGGAGACCCATGCGTGA

Protein sequence :
MADIEIRNVYKIFGHDAKKALGMVRDGLGKADILAKSGCSVGLNDVSLKIGAGKIFVIMGLSGSGKSTLVRHINRLIDPT
SGEVLFDGSNILDLDAKALRAFRMRRVSMVFQSFALMPHRTVLQNVVYGQRVRGVAKADAREIGMKWIETVGLSGYDAKF
PHQLSGGMKQRVGLARALAADTDVILMDEAFSALDPLIRGDMQDQLLQLQQNLSKTIVFITHDLDEALRIGSEIAILKDG
QVVQVGNPSEILDNPANDYVARFVQRRHERPETHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-35 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-35 43