Gene Information

Name : Smed_2536 (Smed_2536)
Accession : YP_001328201.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 2633597 - 2635000 bp
Length : 1404 bp
Strand : +
Note : catalyzes the formation of arginine from (N-L-arginino)succinate

DNA sequence :
ATGGCTGACGGCAGTTCCGAGACGAAATCCTCCAACCAGATGTGGGGCGGTCGCTTCGCCTCGGGGCCCGCTTCCATCAT
GGAGGAGATAAATGCCTCGATCGGCTTCGACAAGAAGCTCTATGCCCAGGACATCCGCGGCTCAATAGCGCATGCGACGA
TGCTGGCGCAGCAAGGCATCATTTCCGCCGAGGACAAAGACAAGATCGTTCACGGCCTCAACACGATATTGTCAGAGATC
GAAGCCGGCGCATTCGAGTTCTCGCGTCGCCTCGAGGACATTCACATGAACATCGAAGCGCGGCTGGCGGCGCTGATCGG
CCCTGCCGCCGGGCGCCTCCATACGGCGCGGTCGCGCAACGACCAGGTTGCGCTCGATTTTCGCCTGTGGGTCAAGGAAG
AGCTTCAGAAAGCCGATGCGGCACTCACGGCTCTGATCGCCGCCTTTCTCGACCGCGCCGAGGAGCATGCCGAAACCGTG
ATGCCCGGCTTCACCCATCTGCAGACGGCGCAGCCGGTCACCTTCGGGCATCACTGCATGGCCTATGTGGAAATGTTCGG
CCGCGACCGGGCGCGTGTTCGTCACGCGATCGAGCACATGGACGAGAGCCCGATCGGCGCTGCAGCCCTCGCCGGCACGG
GCTTTCCGATCGACCGGCACATGACCGCCAGGGCGCTCGGCTTCCGCGAGCCGACGCGCAACTCGATCGATACGGTTTCC
GACCGCGACTTCGCGCTGGAGTTTCTCGCGATCGCAGCGATCGCGGCGACGCACCTGTCGCGGCTTGCAGAAGAAATCGT
CATCTGGTCTACGCCGCAATTCGGCTTCATCCGGCTCTCGGACGCCTTTTCGACCGGATCCTCGATCATGCCGCAGAAGA
AGAATCCGGATGCGGCGGAGCTCGTACGTGCCAAGACGGGCCGCGTCAACGGCTCGCTGATCGCACTGCTGACGGTGATG
AAGGGCCTCCCGCTCGCCTATTCCAAGGATATGCAGGAAGACAAGGAACAGGTCTTCGATGCGGCCGAGAGCCTCGAGCT
CGCGATCGCGGCAATGACCGGCATGGTCCGCGACCTGACCGTGCGGGCCGACCGGATGAAATCCGCAGCCGGTTCCGGCT
ATTCGACAGCGACCGATCTCGCCGACTGGCTGGTGCGCGAGGCAGGCCTTCCTTTCCGTGACGCCCACCATGTGACCGGT
CGCGTGGTCGCGCTTGCCGAAGAGAAGGAATGCGATCTCGCCGACCTGCCGCTGGGCGAACTTCAGGCGATCCATTCCGC
GATCACGGACAAGGTCTTCGGCGTCCTGACGGTCGAGGCCTCCGTGGCGAGCCGCACCAGTTTCGGCGGTACCGCGCCCT
CCGAGGTCCGCAAGCAGATCGCCTGGTGGCGGGCGCGCGATTGA

Protein sequence :
MADGSSETKSSNQMWGGRFASGPASIMEEINASIGFDKKLYAQDIRGSIAHATMLAQQGIISAEDKDKIVHGLNTILSEI
EAGAFEFSRRLEDIHMNIEARLAALIGPAAGRLHTARSRNDQVALDFRLWVKEELQKADAALTALIAAFLDRAEEHAETV
MPGFTHLQTAQPVTFGHHCMAYVEMFGRDRARVRHAIEHMDESPIGAAALAGTGFPIDRHMTARALGFREPTRNSIDTVS
DRDFALEFLAIAAIAATHLSRLAEEIVIWSTPQFGFIRLSDAFSTGSSIMPQKKNPDAAELVRAKTGRVNGSLIALLTVM
KGLPLAYSKDMQEDKEQVFDAAESLELAIAAMTGMVRDLTVRADRMKSAAGSGYSTATDLADWLVREAGLPFRDAHHVTG
RVVALAEEKECDLADLPLGELQAIHSAITDKVFGVLTVEASVASRTSFGGTAPSEVRKQIAWWRARD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 5e-103 51
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 5e-103 51