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Name : Smed_2499 (Smed_2499) Accession : YP_001328164.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2592576 - 2595182 bp Length : 2607 bp Strand : - Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sme:SMc02433 probable ATP-dependent protease (heat shock protein) DNA sequence : ATGGATATCGAAAAATATTCGGAACGCGTGCGCGGGTTCCTGCAGTCGGCGCAGACCTATGCGCTGGCAGAAGGGCACCA GCAGTTCACGCCGGAGCACGTCCTCAAGGTCTTGCTCGACGACGACCAGGGCATGGCGGCCTCGCTCATCGAGCGCGCCG GCGGAAATGCGCGCGAGGCGAAAGTCGGTACCGCCGCAGCTTTGGCCAAGCTTCCGAAGGTGACCGGCGGCAATGGCTCG GTCTATCTGTCGCAGCCGCTCGCCAAGGTATTCACCGCAGCCGAGGACGCCGCAAAGAAGGCCGGCGACAGCTTCGTCAC GGTCGAGCGCCTGCTTCTGGCATTGGCGATCGAAAGCTCGGCGGCGACGGCCTCGATTCTCTCCAAGGCCGGCGTTACGC CGACGAAGCTCAACCAGGTCATCAATGAAATTCGCAAGGGCCGCACCGCCGACAGCGCGAATGCCGAACAGGGCTTCGAC TCGCTCAAGAAATATGCCCGCGATCTGACCGCCGAGGCGAGGGAAGGCAAGCTCGATCCGGTGATCGGCCGTGACGACGA GATCCGCCGCACGATCCAGGTGCTTTCGCGCCGAACGAAGAACAATCCTGTTCTGATCGGCGAGCCGGGCGTCGGCAAGA CCGCGATCGCAGAAGGCCTGGCACTCAGGATCGTCAACGGCGATGTCCCCGAAAGCCTGAAGGACAAGAGGCTGATGGCG CTCGACATGGGCGCTTTGATCGCCGGTGCAAAGTTCCGCGGTGAGTTCGAAGAGCGGCTCAAGGCCGTGCTGAACGAAGT GCGCTCGGAGGGGGGAGAGATCATCCTCTTCATCGACGAGATGCATACGCTGGTCGGTGCCGGCAAGGCTGAGGGCGCCA TGGATGCATCGAACCTCCTGAAGCCCGCGCTTGCCCGCGGCGAGCTGCACTGCGTCGGCGCGACGACTCTCGACGAATAC CGAAAGCATGTCGAGAAGGACGCAGCCCTTGCCCGGCGGTTTCAGCCGGTGATGGTCGAGGAGCCGACGGTCGAAGATAC GATCTCGATCCTGCGCGGCTTGAAGGAGAAATACGAGCAGCACCACAAGGTGCGGATCTCCGACTCCGCGCTGGTTGCGG CTGCCGCACTTTCCAACCGCTACATCACGGATCGTTTCCTTCCGGACAAGGCTATCGACCTCATGGACGAGGCAGCCTCA CGTCTGAGGATGCAGGTCGACTCCAAACCGGAGGAACTCGACGAGCTGGACCGGCGCGTCATTCAGCTCAAGATCGAACG CGAAGCCTTGAAGAAGGAGACCGACGTATCCTCCAGGGATCGCCTTTCCAAGCTCGAACTCGACCTGTCCTCGCTCGAAG AACAGGCGGCGGCATTGACGGCACGCTGGCAGGCGGAGAAGCAGAAGCTCGGCCGGGCGGCAGACCTCAAGAAGCAGCTC GACGAAGCACGCAACGAACTGCAGATCGCGCAGCGCAAGGGTGAATTCCAGCGGGCAGGCGAACTCGCCTACGGCGTGAT CCCAAACCTCGAAAAGGAACTTACCGAGGCGGAAAGCCAGGATGGCGCCAGCGCCAACCCGATGGTGCAGGAGGTCGTGA CCCCAGACAATATTGCTCATATCGTCTCGCGTTGGACCGGCATTCCGGTCGACAAGATGCTGGAAGGCGAGCGCGACAAG CTGCTCAGGATGGAAGACGAGCTGGCTAAATGGGTCGTCGGTCAGGGCGACGCCGTGCAGGCGGTTTCGCGGGCGGTTCG CCGTTCGCGCGCAGGGCTACAGGATCCGAACCGGCCGATCGGCTCGTTTATTTTCCTAGGCCCGACGGGCGTCGGCAAGA CGGAGCTGACCAAGGCGCTTGCCCGGTTCCTCTTCGACGACGAGACCGCGCTTATGCGGATCGACATGTCGGAATATATG GAGAAGCACTCGGTAGCCCGCCTGATCGGCGCGCCTCCCGGCTATGTCGGCTATGAGGAGGGTGGGGCGCTGACGGAATC CGTTCGTCGCCGGCCCTATCAGGTCGTGCTCTTCGACGAGATCGAGAAGGCGCATCCGGATGTCTTCAACGTGCTTCTGC AGGTGCTTGACGATGGACGTCTGACCGATGGTCAGGGGCGCACCGTCGACTTCAAGAACACGATGATCATCATGACCTCG AACCTCGGTGCGGAATACCTGACCGCACTCGGTGAAAACGAGGACAGCGATGCTGTTCGCGATCAGGTCATGGAGGTGGT GCGCGCGGCTTTCCGTCCGGAATTCCTGAATCGCGTCGACGAGATCATCCTGTTCCACCGGCTGCGTCGCTCGGAGATGG GCGCGATCGTCGACATACAGCTTGAAAGGCTGCGCAAGCTCCTGGCGGATCGCAAGATCACGCTCGAGCTTGAGGACGAT GCACGCGTTTTCCTGGCGGAAAGGGGCTACGATCCTGCTTACGGCGCACGCCCCCTGAAACGGGCGATTCAGAAATATGT CCAGGATCCGCTGGCCGAGAAGGTACTGCAGGGCGAGTTCCCGGACGGGTCGGTGATCAAAGTCGTTACCGGTTCCGACC GCCTCAACTTCGAGCGCGGAGCCGGGACGGACAAAGAAGCCGCGTAA Protein sequence : MDIEKYSERVRGFLQSAQTYALAEGHQQFTPEHVLKVLLDDDQGMAASLIERAGGNAREAKVGTAAALAKLPKVTGGNGS VYLSQPLAKVFTAAEDAAKKAGDSFVTVERLLLALAIESSAATASILSKAGVTPTKLNQVINEIRKGRTADSANAEQGFD SLKKYARDLTAEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMA LDMGALIAGAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKAEGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNRYITDRFLPDKAIDLMDEAAS RLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSRDRLSKLELDLSSLEEQAAALTARWQAEKQKLGRAADLKKQL DEARNELQIAQRKGEFQRAGELAYGVIPNLEKELTEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDK LLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYM EKHSVARLIGAPPGYVGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTS NLGAEYLTALGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLADRKITLELEDD ARVFLAERGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPDGSVIKVVTGSDRLNFERGAGTDKEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-103 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_2499 | YP_001328164.1 | ATPase | VFG2076 | Protein | 1e-116 | 42 |
| Smed_2499 | YP_001328164.1 | ATPase | VFG2084 | Protein | 1e-104 | 42 |
