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Name : Smed_2494 (Smed_2494) Accession : YP_001328160.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Virulence Product : ABC transporter-like protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 2578270 - 2579076 bp Length : 807 bp Strand : + Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2292 iron (III) dicitrate transport system (permease) DNA sequence : ATGCCTGAACAGCTTGCCCTTCCTATCCTTGAAACCCGCGCTGCCTCGATCGGATATGGCGCCAGGCTTATCCTGCGAGA TCTCGACTTATCCGTTCCAGAAGCTTCCTTCACTGTGCTGCTTGGTCCGAATGGCTGCGGAAAATCGACCCTACTCAGGG CACTTGCCGGCCTGATCCGGCCGCAACAGGGCACCGTGCTGATCAACGGATACTCGATTTCGATGTTTCCGCGGAAGGAA CTGGCGCAACGTATCGGACTTCTCTCGCAAAATCAGTCGGCGCCTGAAGGCATGACGGTCATGGATCTGGTCAGGCAGGG CCGTTACCCTCACCGTACCCTGTTTGGCCGATGGACGAAGGAGGACGACGAAGCCTGCGAGGAGGCGCTTGCGGTCACCG ACACGGCGGATCTCGCTGGCGAGAAATTTGATACGCTTTCCGGCGGACAGCGACAGCGCGCCTGGATCGCCATGACCCTG GCGCAACGAACCAGCGTTCTCCTGCTCGACGAGCCAACAACCTTTCTCGACCTTTCCCATCAGATCGATACCCTGCGTCT CGCCCGAAAGCTTGTTCGCGAACGCGGCGTAACCATCGTCGCAGTATTGCACGACCTCAATCAGGCTGCACGTTATGCTG ACAATCTGGTTCTTTTAAAACACGGTGCGATCGTGTCCGAAGGTTCCCCGGCCGATGTCTTGACATCAGATATCGTCAAG CGCGTCTTCGATGTCGATGTGACGATCATCACCGAACCGCGAACGCAGGCTCCGATCTGTGTTCCGGTGGAAGACGCTGA CCTATAG Protein sequence : MPEQLALPILETRAASIGYGARLILRDLDLSVPEASFTVLLGPNGCGKSTLLRALAGLIRPQQGTVLINGYSISMFPRKE LAQRIGLLSQNQSAPEGMTVMDLVRQGRYPHRTLFGRWTKEDDEACEEALAVTDTADLAGEKFDTLSGGQRQRAWIAMTL AQRTSVLLLDEPTTFLDLSHQIDTLRLARKLVRERGVTIVAVLHDLNQAARYADNLVLLKHGAIVSEGSPADVLTSDIVK RVFDVDVTIITEPRTQAPICVPVEDADL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 9e-53 | 47 |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 3e-56 | 47 |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 3e-53 | 45 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 3e-53 | 45 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 2e-53 | 44 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 2e-53 | 44 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 2e-53 | 44 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 2e-53 | 44 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 2e-48 | 43 |
| ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 2e-51 | 42 |
| ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 2e-51 | 42 |
| ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 2e-51 | 42 |
| ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 2e-51 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_2494 | YP_001328160.1 | ABC transporter-like protein | BAC0164 | Protein | 5e-53 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_2494 | YP_001328160.1 | ABC transporter-like protein | VFG0925 | Protein | 7e-64 | 51 |
| Smed_2494 | YP_001328160.1 | ABC transporter-like protein | VFG1042 | Protein | 5e-53 | 47 |
