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Name : Smed_2479 (Smed_2479) Accession : YP_001328146.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 2561742 - 2563736 bp Length : 1995 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTTCCACCGCCGTGAACTGGCGAACGCAATTCGTTTCCTGACTGTCGACGTCGTGCAGAAGGCCAATTCCGGCCATCC CGGGACCGCAATGGGCATGGCGGATATTGCCGAGGTGCTTTGGAACGATTTTCTCAGGCACAATCCGGTCAATCCGAGAT GGATCAACCGTGACCGTTTCGTTCAGTCGAACGGGCATGGTTCGATGCTGACCTATTCGCTGCTGCATCTCTCCGGCTAC GGGGTGACGATTCAGGATTTGAAAGATCATCGAAAGCTGCATTCGAAGACGCCGGGCCATCCGGAATACGGCGTGACGGC CGGAGTCGAGACGACCACCGGTCCGCTTGGCCAGGGCTTCGCCACGGCGGTCGGAATGGCTCTGGCGGAAAAGAAGCTGG CGCAGGAGTTCAACCGCGCCGGTTTCCCCATAGTCGATCACTTCACTTACGTTTTCGTTGGGGACGGCTGCCTCATGGAG GGGGTCGCGCAGGAGGCAGCCTCGCTTGCCGGTACTTTGAAGCTCAACAAGCTGGTCGCTGTCTATGACGACAACAAGAT CTCCATCGACGGCGAGACGCCCGGCTGGTTCGCCGACGATAGCGCCGCTCGTTTCCGTGCGCTCGGCTGGAACGTCATTG CGGATGTGGACGGCCATGATGCCGGCGCCATCGCCGCGGCATTTGCCGCTGCCCGCCAGTCGCAGGACAGGCCGACCATG ATCTGCTGCAAGACGGTGATCGGTTATGGCTCGCCGAACAAGCAGGGCAAGGAAGAGGTGCATGGCGCACCGCTCGGCGT GGAAGAAGTGGCGCGCACCCGCGAGCACCTCGGCTGGGCTCATGAGGCTTTCATCGTGCCGGACGCCGTGATGCAGGCCT GGGATGCCCGTCCGCGCGGCGAAAAAGCGGAAGCCGAATGGAGGACCCTTTTCGAGCGTTACAGAACAAAGCATCCGGAT CTTGCGGCCGAACTGGAACGCCGTAGCGCCGGGCGGCTTCCGGACGGTTTCGACGCGGCCTTTGCGCGCGAGGCCGATCG CATTCTTGGCGGCGAGCCGATCAGGCAGCCGATCCGCAAGGCTTCGAACCGCGTCCTCGGCAATTTGCTTGAAGGCCTCC CGGAAGTGATCGGTGGTTCCGCCGATGTTTCCGTGTCGACGCTGGCATGGACCAGTGCAGCCCGCTCCATCACGCCGGAC GATTTTTCAGGGAATTTCGTGCATTACGGCGTGCGGGAGTTCGGCATGTCCGCCATGATGAACGGTATGGCCGCCCATGG CGGTCTCATTCCCTACGGTGCCTGTTATCTCGTCTTCAGCGACTATAGCCGCAATGCCGTGCGCCTTTCGGCCCTGATGG GTCTCAAGGCGATCTTTCTCTACACGCATGATTCGGTCGGTGTCGGCGAGGACGGACCGACGCACCAGCCCTGCGAGCAG CTCGTGGCGCTCCGCGCTGTTCCCAACATGTCGCTGTGGCGGCCGGGCAGCGAGCTGGAAGCGCTTGTTGCCTGGGAATC CGCTTTGAAGCGCGAGGGGCCTAGCGTGATCGTCGCCGCGCGCCAGGAAGGTGGGGTGTTTGCGCACGAAAGCAGCGACA TCGACGGCATCCGCCGCGGCGGGTACGTGCTGAAGGATTCCGGCGCCAAACCGGACATCGTCCTTGCTGCGACCGGATCG GAGATCGGCCTCATCCTCGAAGCGGCGGCAGTACTGGAGGAGCAAGGCAAAGCGGTGCGGCTGGCTTCCATTCCCAACGG CAATCTCTTCGCACGGCAGGACCGCGGCTATCAGGAAAGCGTCCTGGCTTTCGGCACGCCGACGGTTTTCGTGGAGGCTG CATCGCCGCTTTATTGGTACCAGTTCCTCAAGGGACCGGGTACGGTGGTCGGTGTGGATCGTTTCGGCGAATCAGCGCCC GGACCGGAGATCTATCGCGTCATGAACCTGACGGCCGAGCGGATCGTGTCCGAGGCCAGTCAACTCTTGCGCTGA Protein sequence : MFHRRELANAIRFLTVDVVQKANSGHPGTAMGMADIAEVLWNDFLRHNPVNPRWINRDRFVQSNGHGSMLTYSLLHLSGY GVTIQDLKDHRKLHSKTPGHPEYGVTAGVETTTGPLGQGFATAVGMALAEKKLAQEFNRAGFPIVDHFTYVFVGDGCLME GVAQEAASLAGTLKLNKLVAVYDDNKISIDGETPGWFADDSAARFRALGWNVIADVDGHDAGAIAAAFAAARQSQDRPTM ICCKTVIGYGSPNKQGKEEVHGAPLGVEEVARTREHLGWAHEAFIVPDAVMQAWDARPRGEKAEAEWRTLFERYRTKHPD LAAELERRSAGRLPDGFDAAFAREADRILGGEPIRQPIRKASNRVLGNLLEGLPEVIGGSADVSVSTLAWTSAARSITPD DFSGNFVHYGVREFGMSAMMNGMAAHGGLIPYGACYLVFSDYSRNAVRLSALMGLKAIFLYTHDSVGVGEDGPTHQPCEQ LVALRAVPNMSLWRPGSELEALVAWESALKREGPSVIVAARQEGGVFAHESSDIDGIRRGGYVLKDSGAKPDIVLAATGS EIGLILEAAAVLEEQGKAVRLASIPNGNLFARQDRGYQESVLAFGTPTVFVEAASPLYWYQFLKGPGTVVGVDRFGESAP GPEIYRVMNLTAERIVSEASQLLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-173 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-167 | 52 |
