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Name : Smed_2438 (Smed_2438) Accession : YP_001328105.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2518066 - 2519691 bp Length : 1626 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc02027 putative dipeptide transport ATP-binding ABC transporter protein DNA sequence : ATGACGACGGACAAACTTCTCACCGTCTGCGGCCTTTCGCTTGAAGTTGCGGGATCCGGCCATCAGGTGGTCAAGTCGGT TTCCTTCGACCTCGCGCCGGGCGAGATCTTCGGGATCGTCGGCGAAAGCGGCTCCGGCAAGACGCTGGCGACCAGATCGC TGATCTCGCTGCTGCCACCGAACATCACGGTCACCGGCGGATCGGTGACCTACAAGGGCCGCGACGTGCTGAAGCTGAAG GAAAAAGAGCTACGTCATCTGCGCGGTGCAGAGATCGGCGTGGTCTTCCAGGAGCCGATGACCTCGCTCAATCCGTCGAT GACGATCGGCCGGCAGCTGGAGGAGGGGCTGGTCCTGCACACCAAGGCCCCGGCGCAGGAGCGACGCTTGCGCATCCTCG ACATGTTGAAGCGGGTGGGCATCCGCGATCCGGAGGGGGCGCTTGCCTCCTATCCGCACGAGTTTTCGGGAGGCATGCGC CAGCGCATCATGCTCGCCTCCGTCATGCTTTTGAAGCCGGCGCTGCTGATCGCCGATGAACCGACCACCGCGCTCGACGC CGTGATCCAGCGCGACGTGATGGAACTGATGGTGGAACTGACGCGCGCGGAAGGGACGGCCGTGCTGCTGATCAGCCACG ATCTGCCGATGGTGGCGCGCTACACGAGCCGCATCGTCGTGATGGAAAAGGGTGCGATCGTCGAACAGGGCCGCACCGAA GACCTGCTCACAGCACCGCAGCATCCCTATACGCGGAAGCTCTCGTCGCTGCCCTTTCGCGGCGAGCCACGCCGGATCGA CACGAGCAAGGCGCCCATGATCTCGGCTCGCGAAATCATCGTCGACTATGCCGGCCGGAAGTCCCTGTTCAGAAAGAACA AGCCGAAGCGGGCGCTGCATGGCGTCAGCATCGACATATACGAAGGCGAGGTCGTTGCACTCGTCGGCGGTTCCGGCTCC GGCAAGACGACGCTCGGCCGCACCATTGCCGGCCTCGTCAAGGAAGACGAGGGCCGCATCCAGTTCCAGGGACGGCTGCG CACCGAAAACTGGGCCGATTATCGCCTCAATTGCCAGATGGTTTTTCAGGATCCCTATTCATCACTCGATCCGCGCATGA CCATCCAGGCGCTGGTCGAGGAGGCGCTGAGACTGGTGCCGGGCCTCGACGGTAACGCCAAACGTAAGCGTTCCCTGGAG ACGCTGGAGGAGGTCGGCCTCGGCATGGAGTATGCCGGCCGCTACCCGCACGAGCTTTCCGGAGGCCAACGCCAGCGCGT TGCCATTGCGCGTGCGATCGCGCGCCGGCCGCGCTTCCTGATCGCGGACGAACCGGTTTCCGCGCTCGACGTAACGGTCA GGGCGCAGGTTCTCGATCTCTTCTCGGATCTGCAGAAACGCTACGGCTTTTCCTGCCTGTTCATCAGTCACGACCTCGGC GTCGTCGAACAGGTCGCAGATCGCGTCGTTGTCATGCAGGACGGTCGGATCATCGAGGAGGGGGCCCGGGATTCGATTTT CGACAGCCCGAAGGAGGCCTATACGCGCCGGCTTCTTTCGGCGATTCCCGCCCTCGACCAGAATGAAAACGGCGGCGTGA CTCTCAAATGGTGTCTGGAGAATTGA Protein sequence : MTTDKLLTVCGLSLEVAGSGHQVVKSVSFDLAPGEIFGIVGESGSGKTLATRSLISLLPPNITVTGGSVTYKGRDVLKLK EKELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLVLHTKAPAQERRLRILDMLKRVGIRDPEGALASYPHEFSGGMR QRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKGAIVEQGRTE DLLTAPQHPYTRKLSSLPFRGEPRRIDTSKAPMISAREIIVDYAGRKSLFRKNKPKRALHGVSIDIYEGEVVALVGGSGS GKTTLGRTIAGLVKEDEGRIQFQGRLRTENWADYRLNCQMVFQDPYSSLDPRMTIQALVEEALRLVPGLDGNAKRKRSLE TLEEVGLGMEYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLG VVEQVADRVVVMQDGRIIEEGARDSIFDSPKEAYTRRLLSAIPALDQNENGGVTLKWCLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-71 | 42 |
