|
Name : Smed_2414 (Smed_2414) Accession : YP_001328081.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2490588 - 2492021 bp Length : 1434 bp Strand : - Note : PFAM: aldehyde dehydrogenase; KEGG: sme:SMc01971 putative aldehyde dehydrogenase protein DNA sequence : ATGCTCGACAAGCGGCAATTCTATATCGGTGGTGAATGGGTCGAGCCGGCCACGCAGAACGATCTTTTCGTACTCAACCC GGCGACCGAAAAGCCGATCGCGGTCATCTCGCTCGGCACCGCCGTCGATATCGACCGCGCCGTCGCGGCTGCAAAGAAAG CCTTCGCGAGCTATAGCCGGACCAGCGTCGAGGAGCGGCTGGCACTGCTCGAAAAGCTGCTCGCGATTTACAAGCGCCGC TACGACGAAATGGCCGACACGATCACCGCCGAACTCGGTGCTCCCAAGACGATGAGCAGAGAGCAGCAGGCCGAGGTGGG TGTCGGTCACCTGCAGGGTTTCATCGATGCGCTGAAGCGCTTGAAGCTTAGGGAGAAGCTGCCGAACGGAGACACGCTCC TGCGCGAGCCGATCGGCGTCTGCGGTCTTATCACGCCTTGGAACTGGCCTGTGAATCAGATCGCGCTCAAGGTCGTGCCG GCACTTGCGACAGGCTGCACCTGCATCCTGAAGCCAAGCGAGTTCACGCCGCTGAACGCGATGCTCTACGCCGAGATGAT CGAGGAGGCGGGTTTCCCGGCGGGCGTTTTCAACCTCGTCAATGGTGACGGTATCCATGCGGGAGCGGCACTCTCCAAGC ACAGGGACATCGACATGATGTCCTTCACCGGATCGACGCGCGCCGGTATCGCGGTCAGCAAGGATGCCGCCGACACGGTC AAACGCGTGACTCTCGAACTCGGCGGCAAGTCGCCGAACATCGTCTTCGCCGATGCGGATATCGAGGAACGGGTGACTGC AAGCATTCTCGAGTGCTTCAACAATTCCGGCCAGTCCTGCGACGCGCCGACACGCATGCTCGTCGAGCGCAGTGTCTATG ACGAAGTCGTGGAGATCGCCCGGCGTGTCGGCATGGAGGCGAGGGTCGGCGATCCGACGAAGGAAGGCGCTCACATTGGC CCGCTGGTCAGCCATATTCAGTATGAGCGCGTGCAGACGCTGATCGAAGCCGGTGTTGCTGAAGGCGCGACGCTCCTCGC CGGCGGCCCGGGCAAACCCGAAGGTTTCGAGTCCGGCTATTTCGTCCGGCCGACAATCTTCGCCAATGTCGATAATTCCA TGCGGATCGCGCGCGAGGAAGTGTTCGGCCCGGTCCTTTCGATCATGCCATTCGATACCGAAGAGGAGGCGGTCGCGGTC GCCAACGACACCAATTACGGTCTCGCCGCCTATGTCCAGACGCGCGACCGCGAAAGGGCGGAGCGGGTGGCATCCCGCCT GCGCGCCGGAATGGTGCACATCAACGGCGGTCCGCACCGTTACGGAAGTCCCTTCGGCGGCTACAAGCAGTCGGGCAACG GCCGCGAGGGCGGGATGTTCGGGCTGGAGGATTTCCTGGAGGTGAAAACGGTTCACCTGCCCGACGCAGCCTGA Protein sequence : MLDKRQFYIGGEWVEPATQNDLFVLNPATEKPIAVISLGTAVDIDRAVAAAKKAFASYSRTSVEERLALLEKLLAIYKRR YDEMADTITAELGAPKTMSREQQAEVGVGHLQGFIDALKRLKLREKLPNGDTLLREPIGVCGLITPWNWPVNQIALKVVP ALATGCTCILKPSEFTPLNAMLYAEMIEEAGFPAGVFNLVNGDGIHAGAALSKHRDIDMMSFTGSTRAGIAVSKDAADTV KRVTLELGGKSPNIVFADADIEERVTASILECFNNSGQSCDAPTRMLVERSVYDEVVEIARRVGMEARVGDPTKEGAHIG PLVSHIQYERVQTLIEAGVAEGATLLAGGPGKPEGFESGYFVRPTIFANVDNSMRIAREEVFGPVLSIMPFDTEEEAVAV ANDTNYGLAAYVQTRDRERAERVASRLRAGMVHINGGPHRYGSPFGGYKQSGNGREGGMFGLEDFLEVKTVHLPDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 1e-63 | 47 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-60 | 44 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-53 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_2414 | YP_001328081.1 | aldehyde dehydrogenase | VFG0082 | Protein | 4e-54 | 43 |
