Gene Information

Name : Smed_2307 (Smed_2307)
Accession : YP_001327974.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 2386897 - 2387946 bp
Length : 1050 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02739 putative glycine betaine transport ATP-binding ABC transporter protein

DNA sequence : 
ATGACCGACGCCGTCATTTTCAAGAATGTCGACATCATCTTCGGCAAAAATCCGCAGATCGCAACGCAAATGGTCGATCA
GGGCAAGACGCGGGACGAGATCGGTGCTGCCACCGGGCTGGTCCTGGGGGTCGCCGGCGCTTCGCTGACCATCAACGAGG
GCGAGATTCTCGTTCTGATGGGGCTGTCCGGTTCCGGCAAGTCGACGCTGCTCAGGGCCGTCAACGGCCTTGCGCCGGTT
GTGCGCGGCGAGGTCGAGGTGAAGACCGGGAACGGGGCTCTCAACCCTTATCGCTGCAACGCCAAGTCTCTGCGGGACTT
CCGCATGCATACGGTCTCGATGGTGTTCCAGCAGTTTGCCCTTCTGCCGTGGCGAAGCGTGGCGGACAATGTCGGTTTCG
GGCTCGAATTGGCAGGCGTAGCCGATGCCGAACGGCGCAAGCGCGTCGACGAGCAGCTTGAACTCGTCAATCTTACGCAA
TGGGCGGATCGCAAGGTCAACGAACTCTCAGGCGGCATGCAACAGCGCGTCGGCCTTGCCAGGGCCTTTGCCACCGGAGC
CCCTATCCTTCTGATGGACGAACCGTTCTCGGCACTCGACCCGCTGATCCGCACACGCCTTCAGGACGAATTGCTCGAAT
TCCAGCGGCGGTTAAAAAAAACGATCATCTTCGTCAGCCACGACCTCGACGAGGCCTTCCGCATCGGCAACCGGATCGCC
ATCATGGAAGGTGGAAGAATCATCCAGTGCGGAACGCCGCAGGAGATCGTGAGGAGCCCGGCAAACCAGTATGTCGCCGA
TTTCGTCCAGCACATGAATCCGATTTCGATGCTGACGGCGAAGGATGTGATGCAGAGCGGTGTCGGGCGAACCGCTGCAA
GTACCGGCGTCACGGCGACCGCAAAGCCAACCACGCCACTCGTCGATATTCTCGATGCCATGTCGCGCCAGCCGGGCAGC
ATAGGTGTGGTCGACAACGGCGCGGTCGTCGGTACTATCGACGCGCAGAACATCGTCGAGGGACTGACGCGCCACCGCAG
CAAAAACTGA

Protein sequence : 
MTDAVIFKNVDIIFGKNPQIATQMVDQGKTRDEIGAATGLVLGVAGASLTINEGEILVLMGLSGSGKSTLLRAVNGLAPV
VRGEVEVKTGNGALNPYRCNAKSLRDFRMHTVSMVFQQFALLPWRSVADNVGFGLELAGVADAERRKRVDEQLELVNLTQ
WADRKVNELSGGMQQRVGLARAFATGAPILLMDEPFSALDPLIRTRLQDELLEFQRRLKKTIIFVSHDLDEAFRIGNRIA
IMEGGRIIQCGTPQEIVRSPANQYVADFVQHMNPISMLTAKDVMQSGVGRTAASTGVTATAKPTTPLVDILDAMSRQPGS
IGVVDNGAVVGTIDAQNIVEGLTRHRSKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 2e-58 44