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Name : Smed_2260 (Smed_2260) Accession : YP_001327927.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2336801 - 2338309 bp Length : 1509 bp Strand : - Note : PFAM: aldehyde dehydrogenase; KEGG: sme:SMc02689 probable aldehyde dehydrogenase protein DNA sequence : ATGCTGCATCAGAAGATCGTCGAGAACCCGTTCAAACAGAACTACGGAAATTTCATCGGCGGCGAATGGCGCGAGCCTGT GGCCGGCCGCTATTTCGACAACACCACGCCGATTACCGGCGGCACGCTGTGCCAGGTCGCGCGCTCGGACGCTGCCGACA TCGAGCTTGCCCTGGACGCGGCGCATGCCGCCAGGGAGAAATGGGGCCGGACCCCGGCGGCCGAGCGGTCCAACATTCTC ATGAAGATCGCCACCCGCATGGAGGACAATCTCGAGCTTCTGGCGAGAGCCGAAACATGGGACAACGGCAAGCCGATCCG CGAGACGATGGCTGCCGACATTCCTCTGGCGATCGACCACTTCCGCTATTTCGCGTCCTGCATCCGTGCGCAGGAAGGTT CGATAGGAGAGATCGACCACGATACCGTCGCCTATCATTTTCACGAGCCGCTAGGCGTCGTCGGCCAGATCATCCCCTGG AACTTCCCGATCCTGATGGCCTCCTGGAAGCTGGCGCCGGCGCTTGCCGCCGGAAATTGCGTCGTGCTCAAGCCCGCCGA GCAGACGCCGGGTTCGATCCTCGTCTGGGCTGACCTGGTCGGCGATCTCCTGCCGCCGGGCGTCCTCAACATCGTAAACG GTTTCGGCCTCGAAGCGGGCAAGCCGCTTGCCACAAGCCCGCGTATCGCCAAGATCGCCTTCACCGGCGAGACGACGACC GGGCGGCTGATCATGCAGTATGCCAGCCAGAACCTCATTCCCGTCACGCTGGAGCTTGGCGGAAAGTCGCCGAACATCTT CTTCGCGGACGTCGCCAGCGAAGACGACGACTTCTTCGACAAGGCGCTCGAAGGCTTTGCCATGTTCGCGCTGAACCAGG GTGAGGTCTGCACCTGCCCGAGCCGGGCGCTTGTCCAGGAGAGCATCTACGACCGCTTCATGGAGCGGGCGGTAAAGAGG GTCGAGGCGATCCGCCAGGGTAATCCGCTCGATGCGGCAACCATGATCGGTGCCCAGGCGTCGAGCGAACAGCTCGAGAA AATCCTCGCCTATATCGAGATCGGCAAGGAGGAAGGCGCGGACGTCCTGACAGGCGGAGGACGCAATGTGCTCGAAGGCG ATCTTTCCGGCGGCTATTACGTCAAACCGACCGTGTTCCACGGTCACAACAAGATGCGCATCTTCCAGGAGGAGATTTTT GGGCCGGTCGTGTCGGTGACGACCTTCAAGACGGAAGCCGAGGCGCTGGAAATCGCCAACGATACGCTTTACGGCCTCGG CGCCGGTGTGTGGAGCCGCGATGCGAACCGCTGCTACCGCTTCGGCCGCGAGATTCAGGCGGGCCGCGTGTGGACCAATT GCTATCACGCCTATCCGGCCCATGCTGCTTTCGGCGGCTACAAGCAATCCGGCATCGGGCGCGAGACGCATAAGATGATG CTCGACCACTATCAGCAGACGAAGAACATGCTGGTCAGCTACAGCCCGAAGGCGCTCGGCTTCTTCTGA Protein sequence : MLHQKIVENPFKQNYGNFIGGEWREPVAGRYFDNTTPITGGTLCQVARSDAADIELALDAAHAAREKWGRTPAAERSNIL MKIATRMEDNLELLARAETWDNGKPIRETMAADIPLAIDHFRYFASCIRAQEGSIGEIDHDTVAYHFHEPLGVVGQIIPW NFPILMASWKLAPALAAGNCVVLKPAEQTPGSILVWADLVGDLLPPGVLNIVNGFGLEAGKPLATSPRIAKIAFTGETTT GRLIMQYASQNLIPVTLELGGKSPNIFFADVASEDDDFFDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMERAVKR VEAIRQGNPLDAATMIGAQASSEQLEKILAYIEIGKEEGADVLTGGGRNVLEGDLSGGYYVKPTVFHGHNKMRIFQEEIF GPVVSVTTFKTEAEALEIANDTLYGLGAGVWSRDANRCYRFGREIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM LDHYQQTKNMLVSYSPKALGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-149 | 65 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 3e-155 | 65 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 3e-155 | 65 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 3e-155 | 65 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-154 | 65 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 4e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_2260 | YP_001327927.1 | aldehyde dehydrogenase | VFG0082 | Protein | 7e-150 | 65 |
