Gene Information

Name : Smed_1753 (Smed_1753)
Accession : YP_001327423.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1834048 - 1834890 bp
Length : 843 bp
Strand : -
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04295 putative peptide transport system permease ABC transporter protein

DNA sequence :
GTGTTGGCGCGTCTCCTGCGGAGGCCGCTCGCGATCATCGGCTTTGCAATCATCGTCGTGGTGGTAAGCGCAGCAGCGCT
TGCGCCATGGATAGTGCCATATGACCCGCACGAGCAGTTCTTCGAGGGCCTGACCATCGAAGGCGCGCCGCTGCCGCCCA
ATAGCCAATTCTGGCTGGGTACCGATCTTGTCGGACGCGATCTGCTGAGCCGCCTGATATACGGTGCGCGTACCTCGCTC
ATCATCGGCGTGGTCGCCAATGGCATTGCCGTTCTCATCGGCTCGCTCGTCGGCATTGCAGCCGGCTATTTTCGGGGCTG
GGTGGACACCGTGCTGATGCGCTTCACCGATCTGATGATGGCTTTCCCGGCGCTTCTCCTCGCCATCGTTCTGGCCGCCA
TCTTCACCCCCAGCCTGTGGATCGTGGCGATGGTCATCGCCATGGTGAACTGGGTGCAGATCGCCCGCGTCGTCTATACG
GAAACCCGCTCGATTGCCGAGCGCGATTTCGTCACGGCGGAGCGCGCTCTGGGGGCCGGTGCCGGGCGAATTCTCTTCCG
TCACATCCTGCCGCATCTCCTGTCCACTATCATCGTCTGGGCGACGCTCGGTATCGCGACGACAGTACTTCTGGAGGCGA
CGCTTTCTTTCCTCGGCATCGGCGTGCAGCCGCCCATTCCCTCCTGGGGCAACATCATCTTCGAAAACCAGACCTATTTC
ACCTCGGCACCCTGGCTGGTGTTCATACCGGGTGCCGCGATCCTCGCGCTTGCGCTCGCCTTCAATCTGGTCGGTGATGC
GCTGCGCGATGTTCTCGATCCGACGCAGCAGGGGAGGCATTGA

Protein sequence :
MLARLLRRPLAIIGFAIIVVVVSAAALAPWIVPYDPHEQFFEGLTIEGAPLPPNSQFWLGTDLVGRDLLSRLIYGARTSL
IIGVVANGIAVLIGSLVGIAAGYFRGWVDTVLMRFTDLMMAFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYT
ETRSIAERDFVTAERALGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYF
TSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQGRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 7e-30 42