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Name : Smed_1749 (Smed_1749) Accession : YP_001327419.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1828694 - 1830493 bp Length : 1800 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc04288 putative peptide transport ATP-binding ABC transporter protein DNA sequence : ATGACATTGCCAAGGCTTTGCCCGATGACTCTCCCTCTGCTTTCCGTGAACGACCTGAGCGTCCAGGTGGCCACGCCGAC CGGGCCGAAGGTCGTCGTGGAGCGGCTGTCCTTCGATCTGCTTCCAGGCAAGACGCTTTGCCTTGCAGGTGAGAGCGGAT CTGGAAAATCGATGACGGCCCTGTCGCTGATGCAACTGCTGCCGAAGCCGACGGCGCGAATCGCGGACGGCTCGGCCATT CTCGATGGTGACGACATACTCGCTCTTCCCGAAGCACGCATGCGGCAGGTTCGCGGGCGCAAGATCGGGATGATCTTTCA GGAGCCCATGACCTCGCTCAACCCCGTGATGACCGTCGGTGCGCAACTGGTCGGAGCGATCACCGCCCACGGCAGCCGAG GCCGGCGCGCTTCGCATGCGCGCGCCGTCGAACTCCTGGACCAGGTCCAGATTCCGGAACCGGAGCGCCGGCTCGGCCAG TATCCGCACGAGCTTTCCGGTGGCTTGCGTCAGCGTATCGTCATCGCGATGGCGCTCGCGCAGAACCCGCGCATTCTGAT CGCGGATGAACCGACGACTGCGCTCGACGTAACGGTTCAGGCCCAGATCCTGGCGCTTATCCGCAAGCTGCAGGCCGATC ACGGAATTTCGGTGATCATGATCACCCATGACATGGGCGTGGTCGCGGAGATGGCCGACGAGGTGCTGGTGATGAAGCAT GGCCGAACTGTCGAGCATGCAACCACCAAGGATCTTTTCGCGCGTCCTGAGGATGCGTATACGAAGGAGCTTCTTTCGGC CGTGCCGCGTCTCGGCGAAATGGCAGGGTCGGAGATACCCAAGCGCGCTGCGGGAAGGGCGGTCGCCGGATCTTCGAGCG ACGCCGAGCAGCCGATGCTCGAGGTCAAAAACCTGACGGTCCGTTTCGACATCAAGGGCGGCATTCTACAGCGCCCGGTC AAGCGCCTTCACGCGGTGGAGGGCATCTCATTCGATGTGCTGAAGGGGGAGACGCTGTCTCTTGTCGGAGAATCCGGCTG TGGCAAGTCGACGACCGGAAAGGCTCTGTTGAACCTTTTGCCATGGGCGGGGGAGATACGCGTCAACGGACGCTCCACCC GCGGCTTACGGGGGAGCACGATGCGGCCCATCCTTCGAGACGTCCAGATGATCTTCCAGGATCCTTACGCATCCCTTGAT CCGCGCATGCGGGTTGGCGATCTGGTGGCGGAGCCTCTGGCAATCCATGGGCTGGCAACCGGCAGCGCATTGCGTGACCG GGTGGAATATCTCTTAAAGCGGGTTGGATTATCGCCTGAGCAGATGAAGCGTTACCCGCATGAGTTTTCCGGCGGGCAAC GGCAGCGCATCTGCATTGCTCGGGCTTTGTCGCTGTCACCGAAGCTCATCGTCGCAGATGAATCCGTTGCGGCACTCGAC GTGTCGATCCAGGCTCAGGTGCTCGATCTCCTGCAGGACATCCAGGACGAGACAGGCATCTCCTACCTGTTCATTTCTCA CGACATGGCGGTCGTCGAGCAGATCAGCCATCGGGTAGCGGTCATGTATATGGGCCGGTTCGTCGAAATGGGGACGCGGC GACAGATATTCGAGAATCCGCAGCATCCCTATACGAAGAAACTGATGGCTGCGGTCCCCGTGGCCGATCCGACGAGACCA CGTCGGGATTTCGTACCAAAAGCGGAAGACCTGCCAAGTCCCGTGCGCCCACTGGACTATACGCCATCCTTCCCGCCGGC ATCGGATCTGGGCGGCGGGCATCTCGTCTGGAACGTTTGA Protein sequence : MTLPRLCPMTLPLLSVNDLSVQVATPTGPKVVVERLSFDLLPGKTLCLAGESGSGKSMTALSLMQLLPKPTARIADGSAI LDGDDILALPEARMRQVRGRKIGMIFQEPMTSLNPVMTVGAQLVGAITAHGSRGRRASHARAVELLDQVQIPEPERRLGQ YPHELSGGLRQRIVIAMALAQNPRILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKH GRTVEHATTKDLFARPEDAYTKELLSAVPRLGEMAGSEIPKRAAGRAVAGSSSDAEQPMLEVKNLTVRFDIKGGILQRPV KRLHAVEGISFDVLKGETLSLVGESGCGKSTTGKALLNLLPWAGEIRVNGRSTRGLRGSTMRPILRDVQMIFQDPYASLD PRMRVGDLVAEPLAIHGLATGSALRDRVEYLLKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALD VSIQAQVLDLLQDIQDETGISYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFENPQHPYTKKLMAAVPVADPTRP RRDFVPKAEDLPSPVRPLDYTPSFPPASDLGGGHLVWNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-96 | 42 |
