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Name : Smed_1401 (Smed_1401) Accession : YP_001327082.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1479092 - 1481197 bp Length : 2106 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCGCCCTGCCCTGCTCGACCCGCTGTTTTCGCCTCTCGATACTTTGCCCGGCATCGGACCAAAGACCGGCGAGCTTTA CGCCCGTCTGCTCGGGCGCGAGACGATCGAAGACTGCCGCGTCGTGGATCTTCTGTTCCATGCGCCCCATTCACTGATCG ACCGCCGCCGCCAGCCCGGCATCGCCTATGCTCCAGCCGGTTCGATCGTCACCATTACCGGGCGCGTCGACCGGCACCAG CCCGCCCCCAGCGGCAGGTCGAACGTGCCATATCGCGTCTTTCTTCACGACGATACCGGCGAACTCGCGCTGACCTTCTT CCGCGTGAAGGGCAACTGGCTCGAAAAGGCCCTGCCGGTCGACGAGACGGTCATCGTCAGCGGCAAGGTCGACTGGTTCA ACGGGCGGGCCTCCATGGTACACCCGGATTACATGGTCCGCGCGGCCGAATCGCAGAATATGACGCTCGTCGAACCGGTT TACGGGCTGACGGCGGGCCTGACTTCCAGGCCGCTTCGCAAGTCCATCGAGGCGGCGGTGGCGCGCGTCCCGGACCTGCC GGAGTGGCTGGACGGGGCCCTACTTCGCCAGCAGGGTTTCCAAAGCGTCAAGGAGAGTCTTCAGCGCCTGCACGAACCAC GGGATGACGCAGACATCGACGCGCAGGCTCCCGCGCGCCGCAGGCTAGCCTACGACGAATTCCTGGCGGGGCAGCTTTCG CTCTCGCTCGTTCGCCAGCGACTGCGCAAAGTGTCCGGCACGCCTGTTCATCCAACGGGCCGATTGAGCAGTCCAGTCAT CGCCGCCCTGCCCTTCTCGCTGACGAGCAGCCAGTCGACCGCCGTCGACGAGATCCTTCAAGACATGTCCGGAACAGACC GCATGCTGCGATTGCTGCAGGGTGATGTAGGTTCGGGCAAGACGGCCGTCGCCTTGATGGCGATTCTGGCGGCTCTGGAG GCCGGCGGCCAGGCGGTGCTGATGGCGCCGACGGAAATTCTCGCGCGCCAGCACCACGCCACCCTTTCGAAGTTGGCGGC ACCGGCGGGTATCACCATCGACGTCCTGACCGGCAGGACGAAGGGCAAGGAGCGTGACGCGGTACTGGAGCGCATCGCTT CCGGCGAAACGCAGTTGGTGATCGGCACGCACGCACTTTTTCAGGATGCAGTGAGCTATCGCCACCTCGTCCTCGCCGTG GTCGATGAGCAGCATCGTTTTGGCGTGCACCAGAGATTGCGTCTGACGGCCAAGGGTGTCTCGCCGCACATGCTCGTCAT GACCGCGACACCTATTCCGAGAACACTTGTGCTTGCGGCCTTCGGCGACATGGACGTTTCGAAGCTGACGGAGAAGCCGG CCGGGCGCAAGCCGATCCAGACCGTCACGATACCGAACGAACGGACCGACGAGATCGTGGAGAGGCTCGATGCGGCGCTG AGCCAAGGCAAGAAGGCCTATTGGATCTGCCCTCTCGTCGAGGAGTCCGAGGAAACCGACGCAATGTCTGCCGATGAGCG CTACCAGAGCCTTGCTCGACGGTTCGGCAAGGATGTCGGCCTGGTGCACGGGCGCATGACGGGGCCTGAAAAGGATGCCG TCATGCTCGCCTTCAAGACCGGCGACATCCGGTTGCTCGTGGCAACGACCGTCGTCGAGGTCGGGGTCGACGTGCCGGAC GCCACGATCATGGTGATCGAACACGCCGAACGCTTCGGCCTTGCGCAACTGCATCAGCTTCGGGGGCGCGTTGGTCGCGG CGACGAAGCCTCGACCTGCATCCTGCTTTACAAAAGCCCGCTCAGCGAAGCCGGGCGGGCTCGGCTCTCGGTCCTGCGCG AGACGGAAGACGGCTTTCTGATCGCCGAGGAAGATCTCAGGCTGCGTGGCGAAGGCGAGCTCCTCGGAACGCGCCAATCC GGCACCCCCGGCTTCCTGATCGCCAGTCTCGAGGCGCATGGCGACCTCCTGGAGATGGCGCGAAAGGATGCCGCCTATGT GATCGATCGGGATCCGGAACTGACATCGGAACGCGGTGCGGCGCTCAGGATGCTTCTGTATCTCTTCCGTCGCGACGAGG CGATCCGGTTCCTCCGCGCCGGCTGA Protein sequence : MRPALLDPLFSPLDTLPGIGPKTGELYARLLGRETIEDCRVVDLLFHAPHSLIDRRRQPGIAYAPAGSIVTITGRVDRHQ PAPSGRSNVPYRVFLHDDTGELALTFFRVKGNWLEKALPVDETVIVSGKVDWFNGRASMVHPDYMVRAAESQNMTLVEPV YGLTAGLTSRPLRKSIEAAVARVPDLPEWLDGALLRQQGFQSVKESLQRLHEPRDDADIDAQAPARRRLAYDEFLAGQLS LSLVRQRLRKVSGTPVHPTGRLSSPVIAALPFSLTSSQSTAVDEILQDMSGTDRMLRLLQGDVGSGKTAVALMAILAALE AGGQAVLMAPTEILARQHHATLSKLAAPAGITIDVLTGRTKGKERDAVLERIASGETQLVIGTHALFQDAVSYRHLVLAV VDEQHRFGVHQRLRLTAKGVSPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTVTIPNERTDEIVERLDAAL SQGKKAYWICPLVEESEETDAMSADERYQSLARRFGKDVGLVHGRMTGPEKDAVMLAFKTGDIRLLVATTVVEVGVDVPD ATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKSPLSEAGRARLSVLRETEDGFLIAEEDLRLRGEGELLGTRQS GTPGFLIASLEAHGDLLEMARKDAAYVIDRDPELTSERGAALRMLLYLFRRDEAIRFLRAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-170 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Smed_1401 | YP_001327082.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 4e-100 | 45 |
