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Name : Smed_1167 (Smed_1167) Accession : YP_001326853.1 Strain : Sinorhizobium medicae WSM419 Genome accession: NC_009636 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1243773 - 1245056 bp Length : 1284 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATATCAAATGGATCCGTGAGAATGCAGACGTCCTCGATAGCGCCCTGGCGAAACGGGGTGCGGGGCCATTGTC GGCATCCCTGATCGCTCTTGACGAGCGCCGCCGGACAATTCTGCAGTCGCTGCAGGACATGCAGTCCCGCCGCAATGCCG CGTCCAAGGAAATCGGCGCCGCAATGGCCCAGAAGAACAGCGAGTTGGCAGACAGGCTCAAGGCCGAAGTCGCCGAGCTC AAGACCACGCTGCCGGCCGCCGAAGAGGAAAGCCGACGGATCGAAGCCGAGCTTACCGATGCGCTGTCGCGCATTCCCAA TGCACCGCTCGACGATGTTCCCGTCGGAGCGGACGAAAGCGCAAACGTCGTAACACGTGTGGTCGGGGCCAAGCCCACAT GGAACCACAAGCCGCTCGAGCATTTTGAGATCGGCGAAGCGCTGGGACTGATGGACTTCGAAGGAGCGGCGAGAATCGCC GGGTCGCGCTTCACGATCCTCAAAGGTCAGCTCGCGCGCCTGGAACGCGCGCTCGGCCAGTTCATGCTCGACCTACACAC AGGGGAACATGGGTACATCGAGGTTCAGCCTCCGTTGCTCGTCCGCGACGATGCGATGTATGGCACCGGCCAGCTGCCGA AATTCACTGATGATCTCTTCCGCACGACTGATGGACGCTGGTTGATCCCGACGGCTGAAGTCCCGCTGACGAACATGGTC CGGGAACAGATCCTCGACGGCGAAAAGCTGCCGCTGCGCTTTACGGCCTTGACCCCATGCTTCCGCTCCGAGGCCGGCTC CGCCGGCCGTGACACCCGAGGTATGTTGCGCCAGCATCAGTTCAATAAAGTCGAACTGGTGTCGATCACGGATGCCGAGA GCGCGCTCGACGAACACGAGCGGATGACTGCTTGTGCCGAGGAGGTACTTAAGCGTCTCGGCCTGCATTACCGTGTGATG ACGCTTTGCACCGGCGACATGGGATTTAGCGCTCGCAAGACGTACGATCTCGAGGTCTGGCTGCCGGGACAGGACGCCTA TCGCGAGATTTCTTCGTGCTCGGTCTGCGGCGATTTTCAAGGCCGCCGAATGAACGCGCGTTACCGCGGAAAAGAAGAAA AGGGGACGAAGTTCGCCCACACGCTGAACGGTTCCGGCGTCGCCCTCGGCCGGGCGCTGATCGCCGTCATCGAGAATTAC CTGAATGAGGACGGCTCTATCACCGTGCCAGACGCCCTCATAGCCTACATGGGCGGCCTGCGACGGATCGAGAAGGCTGC TTAG Protein sequence : MLDIKWIRENADVLDSALAKRGAGPLSASLIALDERRRTILQSLQDMQSRRNAASKEIGAAMAQKNSELADRLKAEVAEL KTTLPAAEEESRRIEAELTDALSRIPNAPLDDVPVGADESANVVTRVVGAKPTWNHKPLEHFEIGEALGLMDFEGAARIA GSRFTILKGQLARLERALGQFMLDLHTGEHGYIEVQPPLLVRDDAMYGTGQLPKFTDDLFRTTDGRWLIPTAEVPLTNMV REQILDGEKLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSITDAESALDEHERMTACAEEVLKRLGLHYRVM TLCTGDMGFSARKTYDLEVWLPGQDAYREISSCSVCGDFQGRRMNARYRGKEEKGTKFAHTLNGSGVALGRALIAVIENY LNEDGSITVPDALIAYMGGLRRIEKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-93 | 51 |
