Gene Information

Name : Smed_1128 (Smed_1128)
Accession : YP_001326814.1
Strain : Sinorhizobium medicae WSM419
Genome accession: NC_009636
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1195972 - 1196775 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA1187 taurine ABC transporter, ATP-binding protein

DNA sequence :
ATGATCGAGAAACCTGTTCAGGACGCGGACTCTGGCCCGAAGATTTCGTTTCAGAACGTGACTCGCCGGTTCGGCGAGGG
CGAGGCCTCGTTCCTCGCGCTTGACCGGCTGAACCTCGACGTCGGCGACGGCGAATTCGTCACCGTGGTGGGGCCATCCG
GTTGCGGCAAATCGACAGCAATGAACATTGCAGCCGGCCTGACCGACGTGTCGGATGGCCGCGTCTTGGTCGATGGCAAG
CCGGTCGACGGGCCGGGGCCCGAGCGCGGTGTGATCTTTCAGCAGTATGCGCTTTTCCCCTGGTTGACGGTTCGCCAGAA
TGTCGAGTTCGGCCTGCGCATCAAGCGTATGCCGGCAGCCGAGCGCAGGCGGATCGCCGATCACTTCATCAGCCTCGTGG
GGTTGAAGGATTTTGCCGATGCTTTGCCCAAGACGCTGTCCGGCGGCATGAAGCAACGTTGCGCCATAGCGCGTGCCTAT
GCGGTCAATCCGACGATCCTCCTCATGGACGAACCGTTCGGTGCGCTGGATGCATTGACCCGCGTCAACATGCAGGACCA
GTTGCTCGATACCTGGAATCGCGAGCGAAGGACGGTGATCTTCATCACCCACGATGTCGATGAGGCGGTCTATCTTGCGA
ACCGCGTAATAGTAATGGCTGCGCGGCCGGGCCGCTTGCACAAGATAATCCCCGTAAACCTGCCATATCCGCGCACGGAG
GAAATGCGGTTGTCGCCTGAATTCGCGGAAATCCGCAATCAGGTTTGGCACGCCGTCTATCACCAGAATACCCGGACAAA
CTAA

Protein sequence :
MIEKPVQDADSGPKISFQNVTRRFGEGEASFLALDRLNLDVGDGEFVTVVGPSGCGKSTAMNIAAGLTDVSDGRVLVDGK
PVDGPGPERGVIFQQYALFPWLTVRQNVEFGLRIKRMPAAERRRIADHFISLVGLKDFADALPKTLSGGMKQRCAIARAY
AVNPTILLMDEPFGALDALTRVNMQDQLLDTWNRERRTVIFITHDVDEAVYLANRVIVMAARPGRLHKIIPVNLPYPRTE
EMRLSPEFAEIRNQVWHAVYHQNTRTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 8e-48 42