Gene Information

Name : Amet_0060 (Amet_0060)
Accession : YP_001317962.1
Strain : Alkaliphilus metalliredigens QYMF
Genome accession: NC_009633
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 81632 - 82582 bp
Length : 951 bp
Strand : +
Note : TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; KEGG: bsu:BG10342 porphobilinogen deaminase (hydroxymethylbilane synthase)

DNA sequence : 
ATGAGAACAATAAAAATCGGATCAAGAGCCAGTCAGCTGGCCCTAGTTCAAGCAGAAATCATTATTAATATGCTAAAGGA
AAAATTCCCTCAATACACCTATGAAATCATTAAGATCACAACATTAGGAGACCGCATACTGGATAAAACATTAGATAAAA
TTGGCGGTAAGGGACTTTTTGTAAAGGAAATTCAAAAGGCACTAGCTGAAGAAAAAATCGATTTAGCCATTCACAGTATG
AAGGACATGCCTGGTGAGACCCCAGAGGAGCTGGTGTTAGGAGCCATTACAAAGAGGGAGGATCCCCGAGATGTGTTGAT
CACAAGGGAAAATAAATCCCTAGAGGAATTGCCCAAGGGCGCAGTGATTGGAAGCAGTAGCCTAAGAAGACAGGCACAAG
TAATGGCACTCAGGGGAGACATCAAAGTGGTTCCCATTCGTGGAAATGTAGGAACGAGACTTGGGAAAATAGAGACAGAA
TCATTGGATGGTGTGATTCTAGCTGCAGCGGGATTAAACCGCCTGGGGCTGAAAGAGAAAATTTCTAGCTATTTAGAAAT
AGAGGACTTCACGCCTGCCGTAGGCCAAGGGGCCTTGGGCTGTGAAGCAAGACGAAAGGATATAGAGATGTTGGAGATGC
TTTTAGCCATCAATCATGAAGAAACCTATCGATGTGTCATGGCAGAGCGGGCATTCTTAAAGCTATTGGAAGGGGGATGT
CATGTTCCCATCGGAGCCTATGGACAGCAGCAGGGACAGGAGTTACATATGACGGGTATGGTAGCCTCTTCCGATGGCAG
GAGAGTCATTAAAGAGCAAGTCATGGGAGACATTGCAGATTTTCAAGCCTTAGGAATCCAATTAGGTGAGACCCTGATTG
AAAAGGGCGCTAAGGAAATACTGGAGACCGTGAATACAGATAATAGGATAGTCAATACAGAGGGTTCTTAG

Protein sequence : 
MRTIKIGSRASQLALVQAEIIINMLKEKFPQYTYEIIKITTLGDRILDKTLDKIGGKGLFVKEIQKALAEEKIDLAIHSM
KDMPGETPEELVLGAITKREDPRDVLITRENKSLEELPKGAVIGSSSLRRQAQVMALRGDIKVVPIRGNVGTRLGKIETE
SLDGVILAAAGLNRLGLKEKISSYLEIEDFTPAVGQGALGCEARRKDIEMLEMLLAINHEETYRCVMAERAFLKLLEGGC
HVPIGAYGQQQGQELHMTGMVASSDGRRVIKEQVMGDIADFQALGIQLGETLIEKGAKEILETVNTDNRIVNTEGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-63 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-63 47